miRNEST 2.0, an integrative microRNA resource :: BLAST
>45304_miR1128:micropc
Length = 108
Score = 141 bits (71), Expect = 1e-34
Identities = 98/107 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaatt 68
|||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| ||
Sbjct: 108 tactccctccgttcggaattacttgtcgtagaaatgaatgtatctagatgtattttagtt 49
Query: 69 ctagatatatccatttccgagacaagtaattcggaacgtagggagta 115
||||||| |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 48 ctagatacatccattttcgagacaagtaatttcgaacggagggagta 2
Score = 48.1 bits (24), Expect = 2e-06
Identities = 87/108 (80%)
Strand = Plus / Plus
Query: 8 ctactccctccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaat 67
|||||||||||||||| |||||| |||| |||||||||||| |||| || ||
Sbjct: 1 ctactccctccgttcgaaattacttgtctcgaaaatggatgtatctagaactaaaataca 60
Query: 68 tctagatatatccatttccgagacaagtaattcggaacgtagggagta 115
|||||||| || |||||| |||||||||||| ||||| ||||||||
Sbjct: 61 tctagatacattcatttctacgacaagtaattccgaacggagggagta 108
>46822_miR1135:micropc
Length = 93
Score = 117 bits (59), Expect = 2e-27
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||||||||||| ||||| |||||| ||||||| |||| |||||||||||||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaaatagatgtatctagacatattttaattctagata 34
Query: 76 tatccatttccgagacaagtaattcggaacg 106
|||||||||||||||||||||||| |||||
Sbjct: 33 catccatttccgagacaagtaattccgaacg 3
>45199_miR1135:micropc
Length = 93
Score = 117 bits (59), Expect = 2e-27
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||||||||||| ||||| |||||| ||||||| |||| |||||||||||||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaaatagatgtatctagacatattttaattctagata 34
Query: 76 tatccatttccgagacaagtaattcggaacg 106
|||||||||||||||||||||||| |||||
Sbjct: 33 catccatttccgagacaagtaattccgaacg 3
>45649_miR1135:micropc
Length = 95
Score = 109 bits (55), Expect = 5e-25
Identities = 83/91 (91%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
|||||||| |||||| ||||| |||||||||||||| ||||||||||||| |||||||||
Sbjct: 95 tccgttcgaaattacttgtcgcagaaatggatgtatctagatgtattttagttctagata 36
Query: 76 tatccatttccgaga-caagtaattcggaac 105
|||||||||||||| |||||||||| ||||
Sbjct: 35 catccatttccgagaccaagtaattccgaac 5
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 68 tctagatatatccatttccgagacaagtaatt 99
|||||||| ||||||||| | |||||||||||
Sbjct: 55 tctagatacatccatttctgcgacaagtaatt 86
>46065_miR1135:micropc
Length = 89
Score = 97.6 bits (49), Expect = 2e-21
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 18 cgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagatata 77
||||||||||||| ||||| | |||||||||||| |||| |||||||||||||||||| |
Sbjct: 89 cgttcggaattacttgtcgcataaatggatgtatctagacgtattttaattctagataca 30
Query: 78 tccatttccgagacaagtaattcggaacg 106
||||||| ||| |||| |||||| |||||
Sbjct: 29 tccattttcgatacaaataattccgaacg 1
>45155_miR1135:micropc
Length = 93
Score = 93.7 bits (47), Expect = 3e-20
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||||||||||| ||||| | ||||| |||||| |||| | |||||||||||||||
Sbjct: 93 tccgttcggaattacttgtcgcaaaaatgaatgtatctagacgccttttaattctagata 34
Query: 76 tatccatttccgagacaagtaattcggaacg 106
|||||||| ||||||||||||||| |||||
Sbjct: 33 catccattttcgagacaagtaattccgaacg 3
>45051_miR1135:micropc
Length = 93
Score = 87.7 bits (44), Expect = 2e-18
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||| ||||||| |||| | |||||||||||| ||||||||||||| |||||||||
Sbjct: 93 tccgttccgaattactcgtcgcaaaaatggatgtatctagatgtattttagttctagata 34
Query: 76 tatccatttccgagacaagtaatt 99
||||||||| ||||| |||||||
Sbjct: 33 catccatttctgagacgagtaatt 10
>45387_miR1439:micropc
Length = 109
Score = 79.8 bits (40), Expect = 4e-16
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaatt 68
|||||||||||||| ||||||| ||||| | |||||||||| ||||||||||||| ||
Sbjct: 2 tactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagtt 61
Query: 69 ctagatatatccatttccgagacaagtaattcggaacgtagggagtat 116
|||| | ||||||||| ||| ||||||| |||||| |||||||||
Sbjct: 62 ttagacacatccatttcaacgacgagtaatttggaacggagggagtat 109
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 89 gacaagtaattcggaacgtagggagta 115
|||||||||||||||||| ||||||||
Sbjct: 28 gacaagtaattcggaacggagggagta 2
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacatgtcgtagaaatggatgt 49
|||||||||||||| |||||| ||||| |||||||||||
Sbjct: 108 tactccctccgttccaaattactcgtcgttgaaatggatgt 68
>45862_miR1135:micropc
Length = 93
Score = 77.8 bits (39), Expect = 2e-15
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 76 tatccatttccgagacaagtaattcggaacg 106
|||||||| | ||| ||||||| ||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacg 3
>45703_miR1135:micropc
Length = 93
Score = 77.8 bits (39), Expect = 2e-15
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 76 tatccatttccgagacaagtaattcggaacg 106
|||||||| | ||| ||||||| ||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacg 3
>45493_miR1135:micropc
Length = 93
Score = 77.8 bits (39), Expect = 2e-15
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 76 tatccatttccgagacaagtaattcggaacg 106
|||||||| | ||| ||||||| ||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacg 3
>45643_miR1136:micropc
Length = 63
Score = 75.8 bits (38), Expect = 7e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccatttccgagac 91
||||| |||||||||||||| ||||||||||||| ||||||||| || ||| ||||||||
Sbjct: 2 tgtcgcagaaatggatgtatctagatgtattttagttctagatacattcatatccgagac 61
Query: 92 aa 93
||
Sbjct: 62 aa 63
>45250_miR1136:micropc
Length = 63
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtattttaattctagatatatccatttc 85
|||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 12 atggatgtatctagatgtattttaattctagatacatccatttc 55
>45292_miR1439:micropc
Length = 112
Score = 67.9 bits (34), Expect = 2e-12
Identities = 93/110 (84%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacatgtcgtagaaatggatgtatttagatgtatttta-at 67
||||||||| ||| ||||||| ||||| || |||||||||| ||||||||||||| |
Sbjct: 2 tactccctctattccgaattacttgtcgcaggtatggatgtatctagatgtattttaggt 61
Query: 68 tc-tagatatatccatttccgagacaagtaattcggaacgtagggagtat 116
|| |||||| ||||||||| | ||| ||||||| |||||| |||||||||
Sbjct: 62 tcttagatacatccatttctgcgacgagtaatttggaacggagggagtat 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacatgtcgtagaaatggatgtat 51
|||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 110 tactccctccgttccaaattactcgtcgcagaaatggatgtat 68
>46174_miR1135:micropc
Length = 93
Score = 65.9 bits (33), Expect = 6e-12
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
|||||||||||||| ||||| |||| ||| ||| ||||||||||||| ||||| |||
Sbjct: 93 tccgttcggaattaattgtcgcgaaaatagatatatctagatgtattttagttctaaata 34
Query: 76 tatccatttccgagacaagtaattc 100
||||||||||||||| |||||||
Sbjct: 33 cgtccatttccgagacaggtaattc 9
>46322_miR1135:micropc
Length = 93
Score = 61.9 bits (31), Expect = 1e-10
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||| ||||||| ||||| | |||||||| | ||||||||||||| |||||||||
Sbjct: 93 tccgttctgaattacttgtcgcacgtatggatgtttctagatgtattttagttctagata 34
Query: 76 tatccatttccgagacaagtaattcggaacg 106
|||||||| | ||| ||||||| ||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacg 3
>45512_miR1136:micropc
Length = 63
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 45 gatgtatttagatgtattttaattctagatatatccatttc 85
||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 15 gatgtatctagatgtattttagttctagatacatccatttc 55
>46513_miR1136:micropc
Length = 63
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtattttaattctagatatatccatttc 85
||||||| || ||||||||||||| ||||||||| |||||||||
Sbjct: 12 atggatgcatctagatgtattttagttctagatacatccatttc 55
>46044_miR1128:micropc
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 ggatgtatttagatgtattttaattctagata 75
|||||||| ||||||||||||| |||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagata 52
>45461_miR1128:micropc
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 ggatgtatttagatgtattttaattctagata 75
|||||||| ||||||||||||| |||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagata 52
>45244_miR1136:micropc
Length = 63
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtattttaattctagatatatccatttc 85
|||||| ||| ||||||||||||| |||| |||| |||||||||
Sbjct: 12 atggatatatctagatgtattttagttctggatacatccatttc 55
>44841_miR1128:micropc
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 44 ggatgtatttagatgtattttaattctagata 75
|||||||| ||||||||||||| |||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagata 52
>46650_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46443_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46231_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46218_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46180_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46136_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45836_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45824_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45818_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45729_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45621_miR1127:micropc
Length = 110
Score = 42.1 bits (21), Expect = 9e-05
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacatgtcgtagaaatggatgtatttagatgtattttaattctagata 75
||||||||||||||| ||| |||||| |||||| || ||| |||||| || ||||||
Sbjct: 5 tccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagttgtagata 64
Query: 76 tatccattt 84
||||||||
Sbjct: 65 catccattt 73
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 tccctccgttcggaattacatgtc 35
||||||||||||||||||| ||||
Sbjct: 110 tccctccgttcggaattacttgtc 87
>45575_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45466_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45150_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45094_miR1128:micropc
Length = 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 32 tgtcgtagaaatggatgtatttagatgtattttaattctagatatatccattt 84
||||| || ||| ||||||| |||||||||||| ||||||||| || |||||
Sbjct: 94 tgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46810_miR1136:micropc
Length = 65
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtatttta 65
|||||||||| |||||||||||||
Sbjct: 12 atggatgtatctagatgtatttta 35
>46139_miR1136:micropc
Length = 65
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtatttta 65
|||||||||| |||||||||||||
Sbjct: 12 atggatgtatctagatgtatttta 35
>45578_miR1136:micropc
Length = 65
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtatttta 65
|||||||||| |||||||||||||
Sbjct: 12 atggatgtatctagatgtatttta 35
>45233_miR1128:micropc
Length = 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 44 ggatgtatttagatgtattttaattcta 71
|||||||| ||||||||||||| |||||
Sbjct: 49 ggatgtatctagatgtattttagttcta 76
>45217_miR1136:micropc
Length = 65
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtatttta 65
|||||||||| |||||||||||||
Sbjct: 12 atggatgtatctagatgtatttta 35
>45029_miR1136:micropc
Length = 65
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatttagatgtatttta 65
|||||||||| |||||||||||||
Sbjct: 12 atggatgtatctagatgtatttta 35
