miRNEST 2.0, an integrative microRNA resource :: BLAST
>45304_miR1128:micropc
Length = 108
Score = 95.6 bits (48), Expect = 7e-21
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 13 ccctccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtccta 72
|||||||||||||||||||||||| |||| ||| || |||||||| ||| | || |||
Sbjct: 104 ccctccgttcggaattacttgtcgtagaa-atgaatgtatctagatgtattttagttcta 46
Query: 73 gatacatccattttcgagacaagtaactccggacggagggagta 116
|||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 45 gatacatccattttcgagacaagtaatttcgaacggagggagta 2
Score = 42.1 bits (21), Expect = 9e-05
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 13 ccctccgttcggaattacttgtcgcagaacatggatatatctaga 57
||||||||||| ||||||||||| | ||| |||||| ||||||||
Sbjct: 6 ccctccgttcgaaattacttgtctc-gaaaatggatgtatctaga 49
>46822_miR1135:micropc
Length = 93
Score = 79.8 bits (40), Expect = 4e-16
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagat 75
|||||||||||||||||||||||||| || ||| ||||||||| ||| | | ||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaa-atagatgtatctagacatattttaattctagat 35
Query: 76 acatccattttcgagacaagtaactccg 103
|||||||||| |||||||||||| ||||
Sbjct: 34 acatccatttccgagacaagtaattccg 7
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 18 cgttcggaattacttgtcgcagaacatggatatatctaga 57
|||||||||||||||||| | ||| |||||| ||||||||
Sbjct: 3 cgttcggaattacttgtctcggaa-atggatgtatctaga 41
>45199_miR1135:micropc
Length = 93
Score = 79.8 bits (40), Expect = 4e-16
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagat 75
|||||||||||||||||||||||||| || ||| ||||||||| ||| | | ||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaa-atagatgtatctagacatattttaattctagat 35
Query: 76 acatccattttcgagacaagtaactccg 103
|||||||||| |||||||||||| ||||
Sbjct: 34 acatccatttccgagacaagtaattccg 7
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 18 cgttcggaattacttgtcgcagaacatggatatatctaga 57
|||||||||||||||||| | ||| |||||| ||||||||
Sbjct: 3 cgttcggaattacttgtctcggaa-atggatgtatctaga 41
>46065_miR1135:micropc
Length = 89
Score = 67.9 bits (34), Expect = 2e-12
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 18 cgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagatac 77
||||||||||||||||||||| || |||||| ||||||||| ||| | | ||||||||
Sbjct: 89 cgttcggaattacttgtcgcataa-atggatgtatctagacgtattttaattctagatac 31
Query: 78 atccattttcgagacaagtaactccg 103
|||||||||||| |||| ||| ||||
Sbjct: 30 atccattttcgatacaaataattccg 5
>45155_miR1135:micropc
Length = 93
Score = 67.9 bits (34), Expect = 2e-12
Identities = 80/94 (85%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagat 75
||||||||||||||||||||||| || ||| || ||||||||| | | | ||||||
Sbjct: 93 tccgttcggaattacttgtcgcaaaa-atgaatgtatctagacgccttttaattctagat 35
Query: 76 acatccattttcgagacaagtaactccggacgga 109
||||||||||||||||||||||| |||| |||||
Sbjct: 34 acatccattttcgagacaagtaattccgaacgga 1
Score = 52.0 bits (26), Expect = 1e-07
Identities = 78/94 (82%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagat 75
|||||||||||||||||||| | ||| |||||| |||||||| || | || ||||||
Sbjct: 1 tccgttcggaattacttgtctc-gaaaatggatgtatctagaattaaaaggcgtctagat 59
Query: 76 acatccattttcgagacaagtaactccggacgga 109
|||| |||||| | ||||||||| |||| |||||
Sbjct: 60 acattcatttttgcgacaagtaattccgaacgga 93
>45649_miR1135:micropc
Length = 95
Score = 65.9 bits (33), Expect = 7e-12
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagat 75
|||||||| ||||||||||||||||| |||||| |||||||| ||| | || ||||||
Sbjct: 95 tccgttcgaaattacttgtcgcagaa-atggatgtatctagatgtattttagttctagat 37
Query: 76 acatccattttcgagac 92
|||||||||| ||||||
Sbjct: 36 acatccatttccgagac 20
>46174_miR1135:micropc
Length = 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagat 75
|||||||||||||| ||||||| ||| || |||||||||||| ||| | || ||| ||
Sbjct: 93 tccgttcggaattaattgtcgc-gaaaatagatatatctagatgtattttagttctaaat 35
Query: 76 acatccattttcgagacaagtaa 98
|| ||||||| ||||||| ||||
Sbjct: 34 acgtccatttccgagacaggtaa 12
>45621_miR1127:micropc
Length = 110
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 ccctccgttcggaattacttgtc 35
|||||||||||||||||||||||
Sbjct: 109 ccctccgttcggaattacttgtc 87
>45051_miR1135:micropc
Length = 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtcctagat 75
||||||| |||||||| |||||| || |||||| |||||||| ||| | || ||||||
Sbjct: 93 tccgttccgaattactcgtcgcaaaa-atggatgtatctagatgtattttagttctagat 35
Query: 76 acatccattttcgagacaagtaa 98
|||||||||| ||||| |||||
Sbjct: 34 acatccatttctgagacgagtaa 12
>45387_miR1439:micropc
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 ccctccgttcggaattacttgtcgca 38
|||||||||| |||||||||||||||
Sbjct: 6 ccctccgttccgaattacttgtcgca 31
