miRNEST 2.0, an integrative microRNA resource :: BLAST
>45304_miR1128:micropc
Length = 108
Score = 129 bits (65), Expect = 5e-31
Identities = 94/105 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |
Sbjct: 108 tactccctccgttcggaattacttgtcgtagaaatgaatgtatctagatgtattttagtt 49
Query: 69 ctagatacatccatatccganacaagnaattccgaacggagggag 113
|||||||||||||| | ||| ||||| |||| |||||||||||||
Sbjct: 48 ctagatacatccattttcgagacaagtaatttcgaacggagggag 4
Score = 58.0 bits (29), Expect = 2e-09
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
||||||||||||||| ||||||||||| ||||||||||||||| | || || |
Sbjct: 2 tactccctccgttcgaaattacttgtctcgaaaatggatgtatctagaactaaaatacat 61
Query: 69 ctagatacatccatatccganacaagnaattccgaacggagggag 113
|||||||||| ||| || ||||| ||||||||||||||||||
Sbjct: 62 ctagatacattcatttctacgacaagtaattccgaacggagggag 106
>46822_miR1135:micropc
Length = 93
Score = 117 bits (59), Expect = 2e-27
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||||||||||||||||| | |||| |||||||||| |||||||||| ||||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaaatagatgtatctagacatattttaattctagata 34
Query: 76 catccatatccganacaagnaattccgaacg 106
||||||| ||||| ||||| |||||||||||
Sbjct: 33 catccatttccgagacaagtaattccgaacg 3
Score = 46.1 bits (23), Expect = 6e-06
Identities = 73/91 (80%)
Strand = Plus / Plus
Query: 18 cgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagataca 77
|||||||||||||||||| ||||||||||||||| | || || ||||||||||
Sbjct: 3 cgttcggaattacttgtctcggaaatggatgtatctagaattaaaatatgtctagataca 62
Query: 78 tccatatccganacaagnaattccgaacgga 108
|| || || | ||||| |||||||||||||
Sbjct: 63 tctatttctgcgacaagtaattccgaacgga 93
>45199_miR1135:micropc
Length = 93
Score = 117 bits (59), Expect = 2e-27
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||||||||||||||||| | |||| |||||||||| |||||||||| ||||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaaatagatgtatctagacatattttaattctagata 34
Query: 76 catccatatccganacaagnaattccgaacg 106
||||||| ||||| ||||| |||||||||||
Sbjct: 33 catccatttccgagacaagtaattccgaacg 3
Score = 46.1 bits (23), Expect = 6e-06
Identities = 73/91 (80%)
Strand = Plus / Plus
Query: 18 cgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagataca 77
|||||||||||||||||| ||||||||||||||| | || || ||||||||||
Sbjct: 3 cgttcggaattacttgtctcggaaatggatgtatctagaattaaaatatgtctagataca 62
Query: 78 tccatatccganacaagnaattccgaacgga 108
|| || || | ||||| |||||||||||||
Sbjct: 63 tctatttctgcgacaagtaattccgaacgga 93
>46065_miR1135:micropc
Length = 89
Score = 97.6 bits (49), Expect = 2e-21
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 18 cgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagataca 77
||||||||||||||||||| | ||||||||||||||| || ||||||| ||||||||||
Sbjct: 89 cgttcggaattacttgtcgcataaatggatgtatctagacgtattttaattctagataca 30
Query: 78 tccatatccganacaagnaattccgaacg 106
||||| | ||| |||| |||||||||||
Sbjct: 29 tccattttcgatacaaataattccgaacg 1
>45649_miR1135:micropc
Length = 95
Score = 93.7 bits (47), Expect = 3e-20
Identities = 80/91 (87%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
|||||||| |||||||||||| | ||||||||||||||| | |||||||| ||||||||
Sbjct: 95 tccgttcgaaattacttgtcgcagaaatggatgtatctagatgtattttagttctagata 36
Query: 76 catccatatccgana-caagnaattccgaac 105
||||||| ||||| | |||| ||||||||||
Sbjct: 35 catccatttccgagaccaagtaattccgaac 5
>45155_miR1135:micropc
Length = 93
Score = 89.7 bits (45), Expect = 4e-19
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||||||||||||||||| | ||||| ||||||||| || ||||| ||||||||
Sbjct: 93 tccgttcggaattacttgtcgcaaaaatgaatgtatctagacgccttttaattctagata 34
Query: 76 catccatatccganacaagnaattccgaacgga 108
||||||| | ||| ||||| |||||||||||||
Sbjct: 33 catccattttcgagacaagtaattccgaacgga 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatcta 54
|||||||||||||||||||| |||||||||||||||
Sbjct: 1 tccgttcggaattacttgtctcgaaaatggatgtatcta 39
>45051_miR1135:micropc
Length = 93
Score = 73.8 bits (37), Expect = 3e-14
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||| |||||||| |||| | ||||||||||||||| | |||||||| ||||||||
Sbjct: 93 tccgttccgaattactcgtcgcaaaaatggatgtatctagatgtattttagttctagata 34
Query: 76 catccat 82
|||||||
Sbjct: 33 catccat 27
>45643_miR1136:micropc
Length = 63
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 31 ttgtcgtanaaatggatgtatctaaacatattttagntctagatacatccatatccgana 90
|||||| | ||||||||||||||| | |||||||| ||||||||||| ||||||||| |
Sbjct: 1 ttgtcgcagaaatggatgtatctagatgtattttagttctagatacattcatatccgaga 60
Query: 91 caa 93
|||
Sbjct: 61 caa 63
>45387_miR1439:micropc
Length = 109
Score = 65.9 bits (33), Expect = 6e-12
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagn 67
||||||||||||||| ||||||||||||| | ||||||||||||| | ||||||||
Sbjct: 1 gtactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagt 60
Query: 68 tctagatacatccat 82
| |||| ||||||||
Sbjct: 61 tttagacacatccat 75
Score = 58.0 bits (29), Expect = 2e-09
Identities = 85/105 (80%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||||| ||||||| ||||| |||||||||| |||||| || || |
Sbjct: 108 tactccctccgttccaaattactcgtcgttgaaatggatgtgtctaaaactaaaatacat 49
Query: 69 ctagatacatccatatccganacaagnaattccgaacggagggag 113
||||||||||||||| | ||||| ||||| ||||||||||||
Sbjct: 48 ctagatacatccatacgtgcgacaagtaattcggaacggagggag 4
>46322_miR1135:micropc
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||| ||||||||||||| | |||||||| |||| | |||||||| ||||||||
Sbjct: 93 tccgttctgaattacttgtcgcacgtatggatgtttctagatgtattttagttctagata 34
Query: 76 catccat 82
|||||||
Sbjct: 33 catccat 27
>46174_miR1135:micropc
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
|||||||||||||| |||||| |||| ||| |||||| | |||||||| |||| |||
Sbjct: 93 tccgttcggaattaattgtcgcgaaaatagatatatctagatgtattttagttctaaata 34
Query: 76 catccatatccganacaagnaattccgaacgga 108
| ||||| ||||| ||| | |||||| ||||||
Sbjct: 33 cgtccatttccgagacaggtaattccaaacgga 1
>45862_miR1135:micropc
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||| ||||||||||||| | ||||||||||||| | ||||||| ||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 76 catccat 82
|||||||
Sbjct: 33 catccat 27
>45703_miR1135:micropc
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||| ||||||||||||| | ||||||||||||| | ||||||| ||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 76 catccat 82
|||||||
Sbjct: 33 catccat 27
>45493_miR1135:micropc
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
||||||| ||||||||||||| | ||||||||||||| | ||||||| ||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 76 catccat 82
|||||||
Sbjct: 33 catccat 27
>45292_miR1439:micropc
Length = 112
Score = 56.0 bits (28), Expect = 6e-09
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaa 55
|||||||||||||| ||||||| |||| | ||||||||||||||||
Sbjct: 110 tactccctccgttccaaattactcgtcgcagaaatggatgtatctaa 64
Score = 42.1 bits (21), Expect = 9e-05
Identities = 86/108 (79%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagn 67
|||||||||| ||| ||||||||||||| | ||||||||||||| | ||||||||
Sbjct: 1 gtactccctctattccgaattacttgtcgcaggtatggatgtatctagatgtattttagg 60
Query: 68 t--ctagatacatccatatccganacaagnaattccgaacggagggag 113
| ||||||||||||| || | || || |||| ||||||||||||
Sbjct: 61 ttcttagatacatccatttctgcgacgagtaatttggaacggagggag 108
>45621_miR1127:micropc
Length = 110
Score = 50.1 bits (25), Expect = 4e-07
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagntctagata 75
|||||||||||||||| ||| | |||| ||||||||||| ||||||| | ||||||
Sbjct: 5 tccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagttgtagata 64
Query: 76 catccat 82
|||||||
Sbjct: 65 catccat 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tccctccgttcggaattacttgtc 35
||||||||||||||||||||||||
Sbjct: 110 tccctccgttcggaattacttgtc 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 90 acaagnaattccgaacggaggga 112
||||| |||||||||||||||||
Sbjct: 88 acaagtaattccgaacggaggga 110
>45512_miR1136:micropc
Length = 63
Score = 46.1 bits (23), Expect = 6e-06
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 45 gatgtatctaaacatattttagntctagatacatccat 82
|||||||||| | |||||||| |||||||||||||||
Sbjct: 15 gatgtatctagatgtattttagttctagatacatccat 52
>46513_miR1136:micropc
Length = 63
Score = 44.1 bits (22), Expect = 2e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 42 atggatgtatctaaacatattttagntctagatacatccat 82
||||||| ||||| | |||||||| |||||||||||||||
Sbjct: 12 atggatgcatctagatgtattttagttctagatacatccat 52
>45634_miR1133:micropc
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||| || || |||||||| | |||| |||||||||| | |||||||| |
Sbjct: 2 tactccctccgtccgaaaatacttgtcatcgaaatagatgtatctanatttattttagtt 61
Query: 69 cta-gatacatccat 82
|| |||||||||||
Sbjct: 62 ttacgatacatccat 76
>45250_miR1136:micropc
Length = 63
Score = 44.1 bits (22), Expect = 2e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 42 atggatgtatctaaacatattttagntctagatacatccat 82
||||||||||||| | ||||||| |||||||||||||||
Sbjct: 12 atggatgtatctagatgtattttaattctagatacatccat 52
>45127_miR1133:micropc
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||| || || |||||||| | |||| |||||||||| | |||||||| |
Sbjct: 2 tactccctccgtccgaaaatacttgtcatcgaaatagatgtatctanatttattttagtt 61
Query: 69 cta-gatacatccat 82
|| |||||||||||
Sbjct: 62 ttacgatacatccat 76
>45057_miR1133:micropc
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||| || || |||||||| | |||| |||||||||| | |||||||| |
Sbjct: 2 tactccctccgtccgaaaatacttgtcatcgaaatagatgtatctanatttattttagtt 61
Query: 69 cta-gatacatccat 82
|| |||||||||||
Sbjct: 62 ttacgatacatccat 76
>46044_miR1128:micropc
Length = 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 44 ggatgtatctaaacatattttagntctagatacatc 79
||||||||||| | |||||||| ||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>45461_miR1128:micropc
Length = 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 44 ggatgtatctaaacatattttagntctagatacatc 79
||||||||||| | |||||||| ||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>44841_miR1128:micropc
Length = 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 44 ggatgtatctaaacatattttagntctagatacatc 79
||||||||||| | |||||||| ||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>46780_miR1128:micropc
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaat 43
|||||||||||| ||||| |||||||| || ||||
Sbjct: 117 tactccctccgtccggaaatacttgtcctagaaat 83
>46650_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>46614_miR1133:micropc
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaat 43
|||||||||||| ||||| |||||||| || ||||
Sbjct: 118 tactccctccgtccggaaatacttgtcctagaaat 84
>46443_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>46231_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>46218_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>46180_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>46136_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45836_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45824_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45821_miR1128:micropc
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaat 43
|||||||||||| ||||| |||||||| || ||||
Sbjct: 117 tactccctccgtccggaaatacttgtcctagaaat 83
>45818_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45729_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45575_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45466_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45150_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
>45094_miR1128:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| || || ||||||||| | ||||||||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggat 39
