miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score = 95.6 bits (48), Expect = 1e-20
 Identities = 100/116 (86%), Gaps = 1/116 (0%)
 Strand = Plus / Minus

                                                                       
Query: 13  actccctccgttcctaaatataagtctttgtagagattccactat-gaatcacgtacgga 71
           ||||||||||||||  ||||||||||||| ||||||||||||||  | |  || ||||||
Sbjct: 162 actccctccgttccataatataagtctttttagagattccactagaggactacatacgga 103

                                                                   
Query: 72  tgtatatagatgcattttagagtgtagattcactcattttgctccgtatgtggtcc 127
           ||||||||||   | ||||||||||||||||||||||||||||  |||||| ||||
Sbjct: 102 tgtatatagacatactttagagtgtagattcactcattttgctttgtatgtagtcc 47



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 cctccgttcctaaatataagtcttt 41
          |||||||| ||||||||||||||||
Sbjct: 5  cctccgtttctaaatataagtcttt 29




>44799_miR1126:micropc
          Length = 86

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                       
Query: 53  actatgaatcacgtacggatgtatatagatgcattttagagtgtagattcactcattttg 112
           |||||||| ||| |||| |||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 83  actatgaaccacatacgaatgtatgtagatgcattttagagtgtagattcatttattttg 24

                             
Query: 113 ctccgtatgtggtccata 130
           ||||||| || |||||||
Sbjct: 23  ctccgtaagtagtccata 6




>45049_miR1126:micropc
          Length = 86

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 66  tacggatgtatatagatgcattttagagtgtagattcactcattttgctccgtatgtggt 125
           ||||||||||||||||   | | ||||||||| | |||||| ||||||||||||||| ||
Sbjct: 17  tacggatgtatatagacatactgtagagtgtacaatcactcgttttgctccgtatgttgt 76

             
Query: 126 cc 127
           ||
Sbjct: 77  cc 78