miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 89.7 bits (45), Expect = 4e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataatacaagagcgtttt-gacactacattagtgtaaaaaacgct 71
||||||||||||| || |||| ||||||||||| | ||||||| |||||||||||| |||
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 72 cttatattatgggacggggggagta 96
|||||||| |||||||| |||||||
Sbjct: 61 cttatattttgggacggagggagta 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataatacaagagcgttttg-acactacattagtgtaaaaaacgct 71
|||||||||||||||| |||| |||||| |||| |||||| ||||| |||||||||
Sbjct: 85 tactccctccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgct 26
Query: 72 cttatattatgggacggggggagta 96
|||||||| || ||||| |||||||
Sbjct: 25 cttatattttgagacggagggagta 1
>46560_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>46416_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>46351_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>46296_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>46229_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>46082_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45853_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45812_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45616_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45608_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45459_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45450_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45382_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>45149_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>44955_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 60 gtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||||||||||||||||||||| ||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttt 49
>46744_miR1436:micropc
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 63 aaaaacgctcttatattatgggacggggggagt 95
||||| |||||||||||||||||||| ||||||
Sbjct: 51 aaaaatgctcttatattatgggacggagggagt 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||||||||||| |||||| ||||
Sbjct: 83 actccctccgtcccataatataagagcatttt 52
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 63 aaaaacgctcttatattatgggacggggggagt 95
||||||| ||||||||||||| |||| ||||||
Sbjct: 33 aaaaacgttcttatattatggaacggagggagt 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
||||||||||| |||||||| |||| ||||||
Sbjct: 1 actccctccgttccataatataagaacgtttt 32
>46194_miR1436:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 42 ttttgacactacattagtgtaaaaaacgctcttatattatgggacggggggagt 95
||||||||||| | ||| | ||||||||| |||||||||| ||||| ||||||
Sbjct: 30 ttttgacactatactaggggcaaaaacgcttttatattatgagacggagggagt 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataatacaagagcgtttt 45
|||||||||||| ||||||| || ||||||||
Sbjct: 83 actccctccgtctcataatataaaagcgtttt 52
>46658_miR1436:micropc
Length = 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 47/53 (88%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 42 ttttgacactacattagtgt-aaaaaacgctcttatattatgggacgggggga 93
||||||||||||| ||| || |||||||| ||||| |||||||||||| ||||
Sbjct: 28 ttttgacactacaatagagtcaaaaaacg-tcttacattatgggacggaggga 79
>46683_miR1436:micropc
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 cttatattatgggacggggggagt 95
||||||||||||||||| ||||||
Sbjct: 37 cttatattatgggacggagggagt 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 14 actccctccgtcccataata 33
||||||||||||||||||||
Sbjct: 60 actccctccgtcccataata 41
>46077_miR1130:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 43/48 (89%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 42 ttttgacactacattagtgt-aaaaaacgctcttatattatgggacgg 88
||||||||||||| ||| || |||||||| ||||| ||||||||||||
Sbjct: 26 ttttgacactacaatagagtcaaaaaacg-tcttacattatgggacgg 72
