miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 107 bits (54), Expect = 2e-24
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 14 atactccctctgtcccataatataagagcgttttttacactagtgtagtgtaaaaaacac 73
|||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||| |
Sbjct: 86 atactccctccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgc 27
Query: 74 tcttatattatgggacggagggagta 99
||||||||| || |||||||||||||
Sbjct: 26 tcttatattttgagacggagggagta 1
Score = 81.8 bits (41), Expect = 1e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 15 tactccctctgtcccataatataagagcgttttttacactagtgtagtgtaaaaaacact 74
||||||||| ||| || ||||||||||||||||| ||||| |||||||||||| ||
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 75 cttatattatgggacggagggagta 99
|||||||| ||||||||||||||||
Sbjct: 61 cttatattttgggacggagggagta 85
>46560_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>46416_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>46351_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>46296_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>46229_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>46082_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45853_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45812_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45616_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45608_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45459_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45450_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45382_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>45149_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>44955_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttttac 51
|||||||| |||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 63 gtaaaaaacactcttatattatgggacggagggagt 98
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
>46744_miR1436:micropc
Length = 83
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 ctcttatattatgggacggagggagt 98
||||||||||||||||||||||||||
Sbjct: 58 ctcttatattatgggacggagggagt 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataagagcgttttt 48
|||||||| |||||||||||||||||| |||||
Sbjct: 83 actccctccgtcccataatataagagcattttt 51
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 16 actccctctgtcccataatataagagcgttttt 48
|||||||| || ||||||||||||| |||||||
Sbjct: 1 actccctccgttccataatataagaacgttttt 33
>45676_miR1436:micropc
Length = 85
Score = 52.0 bits (26), Expect = 9e-08
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 50 acactagtgtagtgt-aaaaaacactcttatattatgggacggagggagt 98
||||||||||||||| ||||||| ||||||||||||| ||||||||||
Sbjct: 36 acactagtgtagtgtcaaaaaacgtacttatattatggggcggagggagt 85
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cttatattatgggacggagggagt 98
||||||||||||||||||||||||
Sbjct: 37 cttatattatgggacggagggagt 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 16 actccctctgtcccataatataag 39
|||||||| |||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>46658_miR1436:micropc
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 18 tccctctgtcccataatataagagcgtttttt-acactagtgtagtgtaaaaaacactct 76
|||||| |||||||||| ||||| |||||||| || ||| |||||||| ||||| |||
Sbjct: 79 tccctccgtcccataatgtaaga-cgttttttgactctattgtagtgtcaaaaaacgtct 21
Query: 77 tatattatgggacggaggga 96
|| |||| ||||||||||||
Sbjct: 20 tacattacgggacggaggga 1
>46187_miR1132:micropc
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 71/83 (85%), Gaps = 3/83 (3%)
Strand = Plus / Minus
Query: 17 ctccctctgtcccataatataagagcgtttttt-acactagtgta-gtgtaaaaaacact 74
||||||| || ||||||| ||||| |||| ||| ||||||||||| |||| ||||| |
Sbjct: 82 ctccctccgttccataatgtaaga-cgttntttgacactagtgtacgtgtgaaaaaacgt 24
Query: 75 cttatattatgggacggagggag 97
|||| ||||||||||||||||||
Sbjct: 23 cttacattatgggacggagggag 1
>46150_miR1130:micropc
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 20 cctctgtcccataatataagagcgtttttt-acactagtgtagtgtaaaaaacactctta 78
|||||||||||||| ||||| |||||||| || |||||||| ||| ||||| |||||
Sbjct: 75 cctctgtcccataacgtaaga-cgttttttgactctagtgtaatgtcaaaaaatgtctta 17
Query: 79 tattatgggacggagg 94
|||||||||||||||
Sbjct: 16 cattatgggacggagg 1
>45479_miR1436:micropc
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 71/84 (84%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 16 actccctctgtcccataatataagagcgttttttacactagtgtagtgt-aaaaaacact 74
|||||||||||||| |||| ||||| ||| | || ||||||||||| |||||||| |
Sbjct: 1 actccctctgtcccgtaatgtaagacattttctgactgtagtgtagtgtcaaaaaaca-t 59
Query: 75 cttatattatgggacggagggagt 98
|||| ||||||||||| |||||||
Sbjct: 60 cttacattatgggacgaagggagt 83
>46261_miR1120:micropc
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 aaaacactcttatattatgggacggag 93
|||||| ||||||||||||||||||||
Sbjct: 50 aaaacattcttatattatgggacggag 76
