miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46744_miR1436:micropc
          Length = 83

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 70/81 (86%), Gaps = 2/81 (2%)
 Strand = Plus / Plus

                                                                      
Query: 8  actccctctgtcccacagtataagatcgtttctcaagctaacatagcttggaaaa-tgat 66
          |||||||| || ||| | ||||||| ||||| ||||||||||| |||||  |||| || |
Sbjct: 1  actccctccgttccataatataagaacgtttttcaagctaaca-agcttacaaaaatgct 59

                               
Query: 67 cttatattatgggacggaggg 87
          |||||||||||||||||||||
Sbjct: 60 cttatattatgggacggaggg 80



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                               
Query: 51 tagcttggaaaatgatcttatattatgggacggaggg 87
          ||||||| |||| | ||||||||||||| ||||||||
Sbjct: 40 tagcttgaaaaacgttcttatattatggaacggaggg 4




>46836_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 59 aaaatgatcttatattatgggacggagggggtat 92
          |||||| ||||||||| |||||||||||| ||||
Sbjct: 53 aaaatgctcttatattttgggacggagggagtat 86




>46560_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>46416_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>46351_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>46296_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>46229_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>46082_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45853_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45812_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45616_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45608_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45459_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45450_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45382_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>45149_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>44955_miR1436:micropc
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 tcttatattatgggacggaggg 87
          ||||||||||||||||||||||
Sbjct: 56 tcttatattatgggacggaggg 77




>46683_miR1436:micropc
          Length = 60

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 67 cttatattatgggacggaggg 87
          |||||||||||||||||||||
Sbjct: 37 cttatattatgggacggaggg 57




>46261_miR1120:micropc
          Length = 76

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 66 tcttatattatgggacggag 85
          ||||||||||||||||||||
Sbjct: 57 tcttatattatgggacggag 76