miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46814_miR1122:micropc
          Length = 55

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                      
Query: 47 tctaaatacggatgtatctagttacattttagtgttagatacat 90
          |||||||||||||||||| ||| || ||||||| ||||||||||
Sbjct: 1  tctaaatacggatgtatcaagtcacgttttagtattagatacat 44




>45977_miR1122:micropc
          Length = 55

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                     
Query: 47 tctaaatacggatgtatctagttacattttagtgttagataca 89
          |||||||||||||||||| ||| || ||||||| |||||||||
Sbjct: 1  tctaaatacggatgtatcaagtcacgttttagtattagataca 43




>46048_miR1439:micropc
          Length = 58

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  aatactccctccgtcccaaaat 30
          ||||||||||||||||||||||
Sbjct: 58 aatactccctccgtcccaaaat 37




>45320_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  aatactccctccgtcccaaaat 30
          ||||||||||||||||||||||
Sbjct: 74 aatactccctccgtcccaaaat 53




>45276_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  aatactccctccgtcccaaaat 30
          ||||||||||||||||||||||
Sbjct: 74 aatactccctccgtcccaaaat 53




>45016_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  aatactccctccgtcccaaaat 30
          ||||||||||||||||||||||
Sbjct: 74 aatactccctccgtcccaaaat 53




>46836_miR1439:micropc
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 10 atactccctccgtcccaaaat 30
          |||||||||||||||||||||
Sbjct: 86 atactccctccgtcccaaaat 66




>45970_miR1439:micropc
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 10 atactccctccgtcccaaaat 30
          |||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaat 79



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tactccctccgtcccaaaat 30
          ||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaat 21




>45205_miR1439:micropc
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 10 atactccctccgtcccaaaat 30
          |||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaat 79



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tactccctccgtcccaaaat 30
          ||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaat 21




>46324_miR1439:micropc
          Length = 113

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  atactccctccgtcccaaaa 29
           ||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaa 94




>45634_miR1133:micropc
          Length = 120

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 10 atactccctccgtcccaaaattcttgtc 37
          ||||||||||||||| ||||| ||||||
Sbjct: 1  atactccctccgtccgaaaatacttgtc 28




>45127_miR1133:micropc
          Length = 120

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 10 atactccctccgtcccaaaattcttgtc 37
          ||||||||||||||| ||||| ||||||
Sbjct: 1  atactccctccgtccgaaaatacttgtc 28




>45057_miR1133:micropc
          Length = 120

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 10 atactccctccgtcccaaaattcttgtc 37
          ||||||||||||||| ||||| ||||||
Sbjct: 1  atactccctccgtccgaaaatacttgtc 28