miRNEST 2.0, an integrative microRNA resource :: BLAST
>46359_miR408:micropc
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 10 ggctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttca 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttca 60
Query: 70 ctcatgcactgcctcttccctggct 94
|||||||||||||||||||||||||
Sbjct: 61 ctcatgcactgcctcttccctggct 85
>46309_miR408:micropc
Length = 83
Score = 165 bits (83), Expect = 8e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 11 gctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcac 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcac 60
Query: 71 tcatgcactgcctcttccctggc 93
|||||||||||||||||||||||
Sbjct: 61 tcatgcactgcctcttccctggc 83
>46155_miR408:micropc
Length = 83
Score = 165 bits (83), Expect = 8e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 11 gctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcac 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcac 60
Query: 71 tcatgcactgcctcttccctggc 93
|||||||||||||||||||||||
Sbjct: 61 tcatgcactgcctcttccctggc 83
>45593_miR408:micropc
Length = 85
Score = 81.8 bits (41), Expect = 9e-17
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| ||||| |||||||| || |||||||||| || ||
Sbjct: 6 gggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctctaccca 64
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggct 85
>46505_miR408:micropc
Length = 83
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| ||||| |||||||| || |||||||||| || ||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctctaccca 63
Query: 74 tgcactgcctcttccctggc 93
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>46052_miR408:micropc
Length = 83
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| ||||| |||||||| || |||||||||| || ||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctctaccca 63
Query: 74 tgcactgcctcttccctggc 93
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>45814_miR408:micropc
Length = 85
Score = 73.8 bits (37), Expect = 2e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| ||||| |||||| || | |||||||||| || ||
Sbjct: 6 gggaacaggcagagcatggatggagctactaacag-aagtacatgttttggctctaccca 64
Query: 74 tgcactgcctcttccctggct 94
|||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggct 85
>46401_miR408:micropc
Length = 83
Score = 71.9 bits (36), Expect = 8e-14
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| ||||| |||||| || | |||||||||| || ||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacag-aagtacatgttttggctctaccca 63
Query: 74 tgcactgcctcttccctggc 93
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>45726_miR408:micropc
Length = 83
Score = 71.9 bits (36), Expect = 8e-14
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 73
|||||||||||||||||||||| ||||| |||||| || | |||||||||| || ||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacag-aagtacatgttttggctctaccca 63
Query: 74 tgcactgcctcttccctggc 93
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>45398_miR408:micropc
Length = 89
Score = 61.9 bits (31), Expect = 8e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 56 ctgttttggcttcactcatgcactgcctcttccctggct 94
||||| ||||| |||||||||||||||||||||||||||
Sbjct: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 56 ctgttttggcttcactcatgcactgcctcttccctggc 93
||||| ||||| ||||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 56 ctgttttggcttcactcatgcactgcctcttccctggc 93
||||| ||||| ||||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45394_miR408:micropc
Length = 112
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 55 tctgttttggcttcactcatgcactgcctcttccctggct 94
|||||| ||||| | |||||||||||||||||||||||||
Sbjct: 73 tctgttgtggctacgctcatgcactgcctcttccctggct 112
>44861_miR408:micropc
Length = 121
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 55 tctgttttggcttcactcatgcactgcctcttccctggct 94
|||||| ||||| | |||||||||||||||||||||||||
Sbjct: 82 tctgttgtggctacgctcatgcactgcctcttccctggct 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 10 ggctgggaacaggcagagcatggatgcagctattaacagaaa 51
|||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 ggctgggaacaggcagggcacgaatggagctatcaacagaaa 42
>45531_miR408:micropc
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 56 ctgttttggcttcactcatgcactgcctcttccctggct 94
||||| ||||| ||||||||||||||||||||||||||
Sbjct: 51 ctgttgtggctctactcatgcactgcctcttccctggct 89
>44968_miR408:micropc
Length = 110
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 55 tctgttttggcttcactcatgcactgcctcttccctggc 93
|||||| ||||| | ||||||||||||||||||||||||
Sbjct: 72 tctgttgtggctacgctcatgcactgcctcttccctggc 110
>44821_miR408:micropc
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 55 tctgttttggcttcactcatgcactgcctcttccctggc 93
|||||| ||||| | ||||||||||||||||||||||||
Sbjct: 81 tctgttgtggctacgctcatgcactgcctcttccctggc 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 11 gctgggaacaggcagagcatggatgcagctattaacagaaa 51
||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 gctgggaacaggcagggcacgaatggagctatcaacagaaa 41
>46728_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 ctgttttggcttcactcatgcactgcctcttccctggc 93
||||| ||||| |||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>46159_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 ctgttttggcttcactcatgcactgcctcttccctggc 93
||||| ||||| |||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>45949_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 actcatgcactgcctcttccctggc 93
|||||||||||||||||||||||||
Sbjct: 75 actcatgcactgcctcttccctggc 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 20 aggcagagcatggatgcagctattaaca 47
|||||||||||||||| |||||| ||||
Sbjct: 10 aggcagagcatggatggagctatcaaca 37
>45551_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 actcatgcactgcctcttccctggc 93
|||||||||||||||||||||||||
Sbjct: 75 actcatgcactgcctcttccctggc 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 20 aggcagagcatggatgcagctattaaca 47
|||||||||||||||| |||||| ||||
Sbjct: 10 aggcagagcatggatggagctatcaaca 37
