miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score = 75.8 bits (38), Expect = 6e-15
 Identities = 84/98 (85%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                       
Query: 7   tactccctccgtcccaaaataagtgtctcaacagtaatacaactttgtactaaagctagt 66
           |||||||||||| ||||||||||||||||||   || ||||| ||| ||||| |||||||
Sbjct: 97  tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38

                                                 
Query: 67  aaaaagttggagacgcttattttgggacggaggcagta 104
           | |||||| |||||  |||||||| |||||||| ||||
Sbjct: 37  acaaagtt-gagacagttattttgagacggagggagta 1



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 7  tactccctccgtcccaaaataagtgtctcaac 38
          ||||||||||||| |||||||| |||||||||
Sbjct: 1  tactccctccgtctcaaaataactgtctcaac 32




>45970_miR1439:micropc
          Length = 99

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 83/99 (83%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gtactccctccgtcccaaaataagtgtctcaacagtaatacaactttgtactaaagctag 65
           ||||||||||||||||||||||||| ||| ||   || || ||||||||||||   ||||
Sbjct: 1   gtactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctag 60

                                                  
Query: 66  taaaaagttggagacgcttattttgggacggaggcagta 104
           || |||||| || ||  ||||||||||||||||| ||||
Sbjct: 61  tacaaagtt-gatacagttattttgggacggagggagta 98



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 7  tactccctccgtcccaaaataagtgtctcaac 38
          |||||||||||||||||||||| ||| |||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaac 67



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 46 caactttgtactaaagctagtaaaaagtt 74
          ||||||||||||| |||||||| ||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42




>45205_miR1439:micropc
          Length = 99

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 83/99 (83%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gtactccctccgtcccaaaataagtgtctcaacagtaatacaactttgtactaaagctag 65
           ||||||||||||||||||||||||| ||| ||   || || ||||||||||||   ||||
Sbjct: 1   gtactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctag 60

                                                  
Query: 66  taaaaagttggagacgcttattttgggacggaggcagta 104
           || |||||| || ||  ||||||||||||||||| ||||
Sbjct: 61  tacaaagtt-gatacagttattttgggacggagggagta 98



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 7  tactccctccgtcccaaaataagtgtctcaac 38
          |||||||||||||||||||||| ||| |||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaac 67



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 46 caactttgtactaaagctagtaaaaagtt 74
          ||||||||||||| |||||||| ||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42




>46048_miR1439:micropc
          Length = 58

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                        
Query: 7  tactccctccgtcccaaaataagtgtctca 36
          ||||||||||||||||||||||||| ||||
Sbjct: 56 tactccctccgtcccaaaataagtgactca 27




>45320_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45276_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45189_miR1439:micropc
          Length = 78

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 7  tactccctccgtcccaaaataagtgtctcaac 38
          |||||||||||| ||||||||| |||||||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaac 45




>45016_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 7  tactccctccgtcccaaaataagt 30
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49