miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45848_miR396:micropc
Length = 137
Score = 272 bits (137), Expect = 8e-74
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgtcaacacgcgcgcgccggccagccatggctttcctttgc 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccacaggctttcttgaactgtcaacacgcgcgcgccggccagccatggctttcctttgc 60
Query: 83 cgcccaacacgatcgcatatgctcttgcatgtctcgatctctgcctgccttgttgatggt 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcccaacacgatcgcatatgctcttgcatgtctcgatctctgcctgccttgttgatggt 120
Query: 143 tcaagaaagtccttgga 159
|||||||||||||||||
Sbjct: 121 tcaagaaagtccttgga 137
>44798_miR396:micropc
Length = 109
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgtcaacacgcgcgcg 57
|||||||||||||||||||||| ||| ||||||||
Sbjct: 1 tccacaggctttcttgaactgtgaactcgcgcgcg 35
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 122 tctgcctgccttgttgatggttcaagaaagtccttgga 159
||||||| |||||| ||||||||||||||||||||||
Sbjct: 72 tctgcctagcttgttcatggttcaagaaagtccttgga 109
>46774_miR396:micropc
Length = 157
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 131 cttgttgatggttcaagaaagtccttgga 159
||||||||| |||||||||||||||||||
Sbjct: 129 cttgttgatagttcaagaaagtccttgga 157
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgt 44
||||||||||||||||||||||
Sbjct: 1 tccacaggctttcttgaactgt 22
