miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 13 tactcccttcgtcccataatataagaacgtttttgacactagtgtaatgtcaaaaacgtt 72
|||||||| ||||||| ||||||||| | ||||| ||||||||||| || |||||||| |
Sbjct: 85 tactccctccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgct 26
Query: 73 cttatattatgggacgg 89
|||||||| || |||||
Sbjct: 25 cttatattttgagacgg 9
>46150_miR1130:micropc
Length = 75
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 42 tttttgacactagtgtaatgtcaaaaacgttcttatattatgggacgg 89
|||||||| |||||||||||||||||| ||||| ||||||||||||
Sbjct: 51 tttttgactctagtgtaatgtcaaaaaatgtcttacattatgggacgg 4
>46744_miR1436:micropc
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||| |||||||||||||||||||||
Sbjct: 1 actccctccgttccataatataagaacgttttt 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||||||||||||||||| ||||
Sbjct: 33 aaaaacgttcttatattatggaacgg 8
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgtttttg 47
||||||| ||||||||||||||||| | ||||||
Sbjct: 83 actccctccgtcccataatataagagcatttttg 50
>46560_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>46416_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>46351_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>46296_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>46229_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>46082_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45853_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45812_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45616_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45608_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45459_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45450_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45382_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45149_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>44955_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| ||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 aaaaacgttcttatattatgggacgg 89
||||||| ||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacgg 73
>45479_miR1436:micropc
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgtttttgacacta 53
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 83 actcccttcgtcccataatgtaagatgttttttgacacta 44
>45676_miR1436:micropc
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 48 acactagtgtaatgtcaaaaa-cgttcttatattatggg 85
||||||||||| ||||||||| ||| |||||||||||||
Sbjct: 36 acactagtgtagtgtcaaaaaacgtacttatattatggg 74
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataagaacgttttt 46
||||||| || ||||||||||||| ||||||||
Sbjct: 85 actccctccgccccataatataagtacgttttt 53
>46658_miR1436:micropc
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 16 tcccttcgtcccataatataagaacgtttttgacactagtgtaatgtcaaaaacgttctt 75
||||| ||||||||||| ||||| |||||||| ||| |||| ||||||||| ||||
Sbjct: 79 tccctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtctt 20
Query: 76 atattatgggacgg 89
| |||| |||||||
Sbjct: 19 acattacgggacgg 6
>46261_miR1120:micropc
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 aaaacgttcttatattatgggacgg 89
||||| |||||||||||||||||||
Sbjct: 50 aaaacattcttatattatgggacgg 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 22 cgtcccataatataagaacgtttt 45
|||||||||||||||||| |||||
Sbjct: 73 cgtcccataatataagaatgtttt 50
>46683_miR1436:micropc
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 actcccttcgtcccataatataag 37
||||||| ||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>46194_miR1436:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 14 actcccttcgtcccataatataagaacgtttttgacacta 53
|||||||||| |||||| ||||| || ||||||||||||
Sbjct: 1 actcccttcgggccataaaataaggacatttttgacacta 40
>46077_miR1130:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 22 cgtcccataatataagaacgtttttgacactagtgtaatgtcaaaaacgttcttatatta 81
||||||||||| ||||| |||||||| ||| |||| ||||||||| ||||| ||||
Sbjct: 71 cgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtcttacatta 12
Query: 82 tgggacgg 89
|||||||
Sbjct: 11 cgggacgg 4
