miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 89.7 bits (45), Expect = 4e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 11 tactccccccgtcccataatataagagcgttttttacactaatgtagtgtc-aaaacgct 69
||||||| |||||||| ||||||||||| |||||||||||| ||||||| | ||||||||
Sbjct: 85 tactccctccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgct 26
Query: 70 cttgtattatgggacggagggagta 94
||| |||| || |||||||||||||
Sbjct: 25 cttatattttgagacggagggagta 1
Score = 58.0 bits (29), Expect = 1e-09
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 11 tactccccccgtcccataatataagagcgttttttacactaatgtagtgt-caaaacgct 69
||||||| ||||| || ||||||||||||||||| ||||| |||||| |||| |||
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 70 cttgtattatgggacggagggagta 94
||| |||| ||||||||||||||||
Sbjct: 61 cttatattttgggacggagggagta 85
>46560_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>46416_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>46351_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>46296_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>46229_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>46082_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45853_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45812_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45616_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45608_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45459_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45450_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45382_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>45149_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>44955_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttac 47
|||||| |||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttttac 45
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
||||||||||| ||||||||||||||||||||
Sbjct: 49 aaaacgctcttatattatgggacggagggagt 80
>46744_miR1436:micropc
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttt 44
|||||| |||||||||||||||||||| |||||
Sbjct: 83 actccctccgtcccataatataagagcattttt 51
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
|||| |||||| ||||||||||||||||||||
Sbjct: 52 aaaatgctcttatattatgggacggagggagt 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 12 actccccccgtcccataatataagagcgttttt 44
|||||| |||| ||||||||||||| |||||||
Sbjct: 1 actccctccgttccataatataagaacgttttt 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
|||||| |||| |||||||| |||||||||||
Sbjct: 32 aaaacgttcttatattatggaacggagggagt 1
>46194_miR1436:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataagagcgttttttacactaatgtagtgtcaaaa 65
|||||| ||||| |||||||||| ||||||||| | ||| | |||||||||||
Sbjct: 83 actccctccgtctcataatataaaagcgtttttgcccctagtatagtgtcaaaa 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 62 aaaacgctcttgtattatgggacggagggagt 93
|||||||| || ||||||| ||||||||||||
Sbjct: 52 aaaacgcttttatattatgagacggagggagt 83
>46658_miR1436:micropc
Length = 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 47/53 (88%), Gaps = 2/53 (3%)
Strand = Plus / Minus
Query: 14 tccccccgtcccataatataagagcgtttttt-acactaatgtagtgtcaaaa 65
|||| |||||||||||| ||||| |||||||| || ||| |||||||||||||
Sbjct: 79 tccctccgtcccataatgtaaga-cgttttttgactctattgtagtgtcaaaa 28
>46683_miR1436:micropc
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 actccccccgtcccataatataag 35
|||||| |||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 tattatgggacggagggagt 93
||||||||||||||||||||
Sbjct: 41 tattatgggacggagggagt 60
>46077_miR1130:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 43/48 (89%), Gaps = 2/48 (4%)
Strand = Plus / Minus
Query: 19 ccgtcccataatataagagcgtttttt-acactaatgtagtgtcaaaa 65
|||||||||||| ||||| |||||||| || ||| |||||||||||||
Sbjct: 72 ccgtcccataatgtaaga-cgttttttgactctattgtagtgtcaaaa 26
