miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46531_miR160:micropc
Length = 80
Score = 159 bits (80), Expect = 9e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaat 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaat 60
Query: 112 ggcgtgcgaggagtcatgca 131
||||||||||||||||||||
Sbjct: 61 ggcgtgcgaggagtcatgca 80
>45701_miR160:micropc
Length = 80
Score = 159 bits (80), Expect = 9e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaat 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaat 60
Query: 112 ggcgtgcgaggagtcatgca 131
||||||||||||||||||||
Sbjct: 61 ggcgtgcgaggagtcatgca 80
>46062_miR160:micropc
Length = 78
Score = 155 bits (78), Expect = 1e-38
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaatg 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaatg 60
Query: 113 gcgtgcgaggagtcatgc 130
||||||||||||||||||
Sbjct: 61 gcgtgcgaggagtcatgc 78
>45256_miR160:micropc
Length = 78
Score = 155 bits (78), Expect = 1e-38
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaatg 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccatttgcagagcccatcagaacagtgatggctttaactaatg 60
Query: 113 gcgtgcgaggagtcatgc 130
||||||||||||||||||
Sbjct: 61 gcgtgcgaggagtcatgc 78
>45916_miR160:micropc
Length = 80
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagccca 85
||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcagagccca 34
>45059_miR160:micropc
Length = 80
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagccca 85
||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcagagccca 34
>46697_miR160:micropc
Length = 78
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagccca 85
|||||||||||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccatttgcagagccca 33
>46422_miR160:micropc
Length = 78
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagccca 85
|||||||||||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccatttgcagagccca 33
>46665_miR160:micropc
Length = 81
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagcccatc 87
|||||||||||||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccattttcagagcccatc 36
>45760_miR160:micropc
Length = 81
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagcccatc 87
|||||||||||||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccattttcagagcccatc 36
>46752_miR160:micropc
Length = 79
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagcccatc 87
||||||||||||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccattttcagagcccatc 35
>46058_miR160:micropc
Length = 79
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagcccatc 87
||||||||||||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccattttcagagcccatc 35
>45645_miR160:micropc
Length = 80
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagcccatc 87
||||||||||||||||||||||||| ||||| ||||
Sbjct: 1 tgcctggctccctgtatgccatttgtagagctcatc 36
>45584_miR160:micropc
Length = 80
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgcagagcccatc 87
||||||||||||||||||||||||| ||||| ||||
Sbjct: 1 tgcctggctccctgtatgccatttgtagagctcatc 36
>45861_miR160:micropc
Length = 78
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagcccatc 87
|||||||||||||||||||||||| ||||| ||||
Sbjct: 1 gcctggctccctgtatgccatttgtagagctcatc 35
>45108_miR160:micropc
Length = 78
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgcagagcccatc 87
|||||||||||||||||||||||| ||||| ||||
Sbjct: 1 gcctggctccctgtatgccatttgtagagctcatc 35
>45756_miR160:micropc
Length = 80
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgc 77
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
>44960_miR160:micropc
Length = 80
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccatttgc 77
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
>46250_miR160:micropc
Length = 78
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgc 77
|||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccatttgc 25
>45411_miR160:micropc
Length = 78
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccatttgc 77
|||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccatttgc 25
>46625_miR160:micropc
Length = 79
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccat 73
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>46225_miR160:micropc
Length = 79
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccat 73
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>45940_miR160:micropc
Length = 79
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccat 73
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>45924_miR160:micropc
Length = 79
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgccat 73
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>46598_miR160:micropc
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46566_miR160:micropc
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccat 73
|||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccat 21
>46489_miR160:micropc
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46355_miR160:micropc
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46232_miR160:micropc
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46219_miR160:micropc
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46179_miR160:micropc
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccat 73
|||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccat 21
>46171_miR160:micropc
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46053_miR160:micropc
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccat 73
|||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccat 21
>46037_miR160:micropc
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46025_miR160:micropc
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45965_miR160:micropc
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45870_miR160:micropc
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45803_miR160:micropc
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45628_miR160:micropc
Length = 80
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45601_miR160:micropc
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45576_miR160:micropc
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45492_miR160:micropc
Length = 80
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45490_miR160:micropc
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgccat 73
|||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgccat 21
>45476_miR160:micropc
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45467_miR160:micropc
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45418_miR160:micropc
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45369_miR160:micropc
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45344_miR160:micropc
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45239_miR160:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45236_miR160:micropc
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45196_miR160:micropc
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45164_miR160:micropc
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45148_miR160:micropc
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45147_miR160:micropc
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45120_miR160:micropc
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>45066_miR160:micropc
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>44884_miR160:micropc
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>44844_miR160:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 tgcctggctccctgtatgcca 72
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>46756_miR160:micropc
Length = 81
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgcca 72
||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgcca 20
>46734_miR160:micropc
Length = 88
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgcca 72
||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgcca 20
>46664_miR160:micropc
Length = 85
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgcca 72
||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgcca 20
>46645_miR160:micropc
Length = 81
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgcca 72
||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgcca 20
>46643_miR160:micropc
Length = 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgcca 72
||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgcca 20
>46629_miR160:micropc
Length = 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgcca 72
||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgcca 20
>46561_miR160:micropc
Length = 85
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gcctggctccctgtatgcca 72
||||||||||||||||||||
Sbjct: 1 gcctggctccctgtatgcca 20
