miRNEST 2.0, an integrative microRNA resource :: BLAST
>46163_miR171:micropc
Length = 83
Score = 165 bits (83), Expect = 8e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 13 aggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgat 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgat 60
Query: 73 ttgattgagccgcgtcaatatct 95
|||||||||||||||||||||||
Sbjct: 61 ttgattgagccgcgtcaatatct 83
>46553_miR171:micropc
Length = 81
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 14 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 60
Query: 74 tgattgagccgcgtcaatatc 94
|||||||||||||||||||||
Sbjct: 61 tgattgagccgcgtcaatatc 81
>45160_miR171:micropc
Length = 81
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 14 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 60
Query: 74 tgattgagccgcgtcaatatc 94
|||||||||||||||||||||
Sbjct: 61 tgattgagccgcgtcaatatc 81
>45337_miR171:micropc
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 15 gtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgattt 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgattt 60
Query: 75 gattgagccgcgtcaatat 93
|||||||||||||||||||
Sbjct: 61 gattgagccgcgtcaatat 79
>45523_miR171:micropc
Length = 82
Score = 65.9 bits (33), Expect = 6e-12
Identities = 73/84 (86%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 13 aggtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtga 71
||||||||||| |||||||||||||||| |||||| ||| | || |||||||||||
Sbjct: 1 aggtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtat 58
Query: 72 tttgattgagccgcgtcaatatct 95
||| ||||||||||||||||||||
Sbjct: 59 tttcattgagccgcgtcaatatct 82
>46593_miR171:micropc
Length = 80
Score = 61.9 bits (31), Expect = 9e-11
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 14 ggtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtgat 72
|||||||||| |||||||||||||||| |||||| ||| | || ||||||||||| |
Sbjct: 1 ggtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtatt 58
Query: 73 ttgattgagccgcgtcaatatc 94
|| |||||||||||||||||||
Sbjct: 59 ttcattgagccgcgtcaatatc 80
>45177_miR171:micropc
Length = 79
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 14 ggtattggcgtgcctcaatttaaagacatggtta 47
||||||||||||||||||||| ||||||||||||
Sbjct: 1 ggtattggcgtgcctcaatttgaagacatggtta 34
>44828_miR171:micropc
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 15 gtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtgatt 73
||||||||| |||||||||||||||| |||||| ||| | || ||||||||||| ||
Sbjct: 1 gtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtattt 58
Query: 74 tgattgagccgcgtcaatat 93
| ||||||||||||||||||
Sbjct: 59 tcattgagccgcgtcaatat 78
>46684_miR171:micropc
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 tttgattgagccgcgtcaatatc 94
|||||||||||||||||||||||
Sbjct: 57 tttgattgagccgcgtcaatatc 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 tattggcgtgcctcaatttaaagacatggttagatga 52
||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1 tattggcgtgcctcaatctaattacatggttaaatga 37
>45361_miR171:micropc
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 tttgattgagccgcgtcaatatc 94
|||||||||||||||||||||||
Sbjct: 57 tttgattgagccgcgtcaatatc 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 tattggcgtgcctcaatttaaagacatggttagatga 52
||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1 tattggcgtgcctcaatctaattacatggttaaatga 37
>45662_miR171:micropc
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 tttgattgagccgcgtcaatat 93
||||||||||||||||||||||
Sbjct: 57 tttgattgagccgcgtcaatat 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 tattggcgtgcctcaatttaaagacatggttagatga 52
||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1 tattggcgtgcctcaatctaattacatggttaaatga 37
>44859_miR171:micropc
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 tgattgagccgcgtcaatatct 95
||||||||||||||||||||||
Sbjct: 63 tgattgagccgcgtcaatatct 84
>46257_miR171:micropc
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgattgagccgcgtcaatatc 94
|||||||||||||||||||||
Sbjct: 63 tgattgagccgcgtcaatatc 83
>45171_miR171:micropc
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tgattgagccgcgtcaatatc 94
|||||||||||||||||||||
Sbjct: 63 tgattgagccgcgtcaatatc 83
>44972_miR171:micropc
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 gattgagccgcgtcaatatct 95
|||||||||||||||||||||
Sbjct: 82 gattgagccgcgtcaatatct 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 aggtattggcgtgcctcaat 32
||||||||||||||||||||
Sbjct: 1 aggtattggcgtgcctcaat 20
>46581_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 tgattgagccgcgtcaatat 93
||||||||||||||||||||
Sbjct: 62 tgattgagccgcgtcaatat 81
>45488_miR171:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 gattgagccgcgtcaatatc 94
||||||||||||||||||||
Sbjct: 81 gattgagccgcgtcaatatc 100
>44829_miR171:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 gattgagccgcgtcaatatc 94
||||||||||||||||||||
Sbjct: 81 gattgagccgcgtcaatatc 100