miRNEST 2.0, an integrative microRNA resource :: BLAST
>45885_miR530:micropc
Length = 135
Score = 204 bits (103), Expect = 2e-53
Identities = 127/135 (94%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttattgcgtgggttttgtttttgactccacaaacaaaatcaa 88
||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatcttattgcttttgttttgttcttgactccacaaacaaaatcaa 60
Query: 89 gttctgtcgatacagtatgtgggacaattagatatggaaactaataagcttagttgaggt 148
||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||
Sbjct: 61 cttctgtcgatacagtatgtggtacaattagctatggaaactcataagcttagttgaggt 120
Query: 149 gcaggtgcaagtgca 163
|||||||||||||||
Sbjct: 121 gcaggtgcaagtgca 135
>46279_miR530:micropc
Length = 148
Score = 170 bits (86), Expect = 2e-43
Identities = 132/149 (88%), Gaps = 15/149 (10%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttattgcgtgggttttgtttttgactccacaaacaaaatcaa 88
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatcaa 59
Query: 89 gttctgtcgatacagtatgtgggacaa--------------ttagatatggaaactaata 134
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 60 gttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaata 119
Query: 135 agcttagttgaggtgcaggtgcaagtgca 163
|||||||||||||||||||||||||||||
Sbjct: 120 agcttagttgaggtgcaggtgcaagtgca 148
>46654_miR1030:micropc
Length = 151
Score = 168 bits (85), Expect = 1e-42
Identities = 134/152 (88%), Gaps = 15/152 (9%)
Strand = Plus / Minus
Query: 28 ctgcatttgcacctgcatcttattgcgtgggttttgtttttgactccacaaacaaaatca 87
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 151 ctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatca 93
Query: 88 agttctgtcgatacagtatgtgggacaattag--------------atatggaaactaat 133
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 92 agttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaat 33
Query: 134 aagcttagttgaggtgcaggtgcaagtgcagg 165
|||||||||||||||||||||||| |||||||
Sbjct: 32 aagcttagttgaggtgcaggtgcaggtgcagg 1
>45830_miR1030:micropc
Length = 150
Score = 167 bits (84), Expect = 4e-42
Identities = 133/151 (88%), Gaps = 15/151 (9%)
Strand = Plus / Minus
Query: 28 ctgcatttgcacctgcatcttattgcgtgggttttgtttttgactccacaaacaaaatca 87
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 150 ctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatca 92
Query: 88 agttctgtcgatacagtatgtgggacaattag--------------atatggaaactaat 133
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 91 agttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaat 32
Query: 134 aagcttagttgaggtgcaggtgcaagtgcag 164
|||||||||||||||||||||||| ||||||
Sbjct: 31 aagcttagttgaggtgcaggtgcaggtgcag 1
>45983_miR530:micropc
Length = 138
Score = 141 bits (71), Expect = 2e-34
Identities = 123/138 (89%), Gaps = 3/138 (2%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttattgcgtgggttttgtttttgactccacaaacaaaatc-a 87
||||||||||||||||||||||||||| | |||| | |||| |||| ||| ||||| |
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 88 agttctgt--cgatacagtatgtgggacaattagatatggaaactaataagcttagttga 145
||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaattagatatggaaactaataagcttagttga 120
Query: 146 ggtgcaggtgcaagtgca 163
||||||||||||||||||
Sbjct: 121 ggtgcaggtgcaagtgca 138
>45671_miR530:micropc
Length = 138
Score = 141 bits (71), Expect = 2e-34
Identities = 123/138 (89%), Gaps = 3/138 (2%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttattgcgtgggttttgtttttgactccacaaacaaaatc-a 87
||||||||||||||||||||||||||| | |||| | |||| |||| ||| ||||| |
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 88 agttctgt--cgatacagtatgtgggacaattagatatggaaactaataagcttagttga 145
||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaattagatatggaaactaataagcttagttga 120
Query: 146 ggtgcaggtgcaagtgca 163
||||||||||||||||||
Sbjct: 121 ggtgcaggtgcaagtgca 138
>46152_miR530:micropc
Length = 134
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttattgcgt 55
|||||||||||||||||||| ||||||
Sbjct: 1 tgcatttgcacctgcatcttgttgcgt 27
>45910_miR530:micropc
Length = 134
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttattgcgt 55
|||||||||||||||||||| ||||||
Sbjct: 1 tgcatttgcacctgcatcttgttgcgt 27
>44837_miR1030:micropc
Length = 109
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 142 ttgaggtgcaggtgcaagtgcagg 165
|||||||||||||||| |||||||
Sbjct: 24 ttgaggtgcaggtgcaggtgcagg 1
