miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>44820_miR157:micropc
Length = 137
Score = 272 bits (137), Expect = 1e-73
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatgaggtacaccgtccggtggccggagctgagga 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatgaggtacaccgtccggtggccggagctgagga 60
Query: 98 tgcatgaatgtgatcggagaattgttagtatatatattgtgtgtatcttcttctttgtgc 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcatgaatgtgatcggagaattgttagtatatatattgtgtgtatcttcttctttgtgc 120
Query: 158 tctctactcttctgtca 174
|||||||||||||||||
Sbjct: 121 tctctactcttctgtca 137
>45944_miR157:micropc
Length = 136
Score = 270 bits (136), Expect = 4e-73
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatgaggtacaccgtccggtggccggagctgaggat 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgaggtacaccgtccggtggccggagctgaggat 60
Query: 99 gcatgaatgtgatcggagaattgttagtatatatattgtgtgtatcttcttctttgtgct 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcatgaatgtgatcggagaattgttagtatatatattgtgtgtatcttcttctttgtgct 120
Query: 159 ctctactcttctgtca 174
||||||||||||||||
Sbjct: 121 ctctactcttctgtca 136
>46332_miR157:micropc
Length = 162
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatga 30
>45911_miR157:micropc
Length = 130
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatga 30
>45538_miR157:micropc
Length = 85
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatga 30
>45409_miR157:micropc
Length = 85
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatga 30
>46821_miR157:micropc
Length = 84
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatga 29
>46718_miR157:micropc
Length = 84
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatga 29
>46391_miR157:micropc
Length = 129
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatga 29
>45959_miR157:micropc
Length = 161
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatga 29
>45761_miR157:micropc
Length = 83
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatga 29
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 150 ctttgtgctctctactcttctgtca 174
|||||||||||||| ||||||||||
Sbjct: 59 ctttgtgctctctattcttctgtca 83
>45152_miR157:micropc
Length = 92
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatg 66
|||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatg 29
>44919_miR157:micropc
Length = 92
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatg 66
|||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatg 29
>45936_miR157:micropc
Length = 91
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatg 66
||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatg 28
>45172_miR157:micropc
Length = 91
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatg 66
||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatg 28
>46830_miR157:micropc
Length = 81
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatg 63
||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatg 26
>46591_miR156:micropc
Length = 78
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
>46542_miR157:micropc
Length = 82
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatg 63
||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacagatg 26
>46032_miR156:micropc
Length = 77
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
>45877_miR156:micropc
Length = 123
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
>45352_miR156:micropc
Length = 155
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
>45004_miR156:micropc
Length = 78
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatga 67
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
>44931_miR157:micropc
Length = 84
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatga 67
||||||||||||||||||||| ||||||||
Sbjct: 1 ttgacagaagatagagagcactgatgatga 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 150 ctttgtgctctctactcttctgtca 174
|||||||||||||| ||||||||||
Sbjct: 60 ctttgtgctctctagtcttctgtca 84
>46572_miR157:micropc
Length = 83
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||| ||||||||
Sbjct: 1 tgacagaagatagagagcactgatgatga 29
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 150 ctttgtgctctctactcttctgtca 174
|||||||||||||| ||||||||||
Sbjct: 59 ctttgtgctctctagtcttctgtca 83
>45840_miR156:micropc
Length = 85
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatg 66
|||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatg 25
>45460_miR157:micropc
Length = 81
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatg 63
|||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatg 25
>45457_miR156:micropc
Length = 85
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatg 66
|||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatg 25
>44822_miR157:micropc
Length = 80
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatg 63
|||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatg 25
>45574_miR157:micropc
Length = 85
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacaga 61
||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacaga 24
>46595_miR157:micropc
Length = 84
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacaga 61
|||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacaga 23
>46687_miR156:micropc
Length = 74
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatg 63
||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatg 22
>46407_miR156:micropc
Length = 75
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatg 63
||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatg 22
>46380_miR157:micropc
Length = 85
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 tgtgctctctactcttctgtca 174
||||||||||||||||||||||
Sbjct: 64 tgtgctctctactcttctgtca 85
>45968_miR157:micropc
Length = 90
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatga 67
||||||||||||||||||||| |||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatga 30
>45257_miR156:micropc
Length = 84
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 tgtgctctctactcttctgtca 174
||||||||||||||||||||||
Sbjct: 63 tgtgctctctactcttctgtca 84
>45009_miR157:micropc
Length = 99
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcacagatgatga 67
||||||||||||||||||||| |||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatga 30
>44952_miR156:micropc
Length = 84
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 tgtgctctctactcttctgtca 174
||||||||||||||||||||||
Sbjct: 63 tgtgctctctactcttctgtca 84
>44856_miR156:micropc
Length = 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacagatgatga 67
||||||||||||||||| ||||||||
Sbjct: 1 cagaagatagagagcactgatgatga 26
>46812_miR157:micropc
Length = 79
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcaca 59
|||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcaca 21
>46790_miR156:micropc
Length = 82
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tgtgctctctactcttctgtc 173
|||||||||||||||||||||
Sbjct: 62 tgtgctctctactcttctgtc 82
>46252_miR157:micropc
Length = 146
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcac 58
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>46100_miR157:micropc
Length = 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||| |||||||
Sbjct: 1 tgacagaagatagagagcactaatgatga 29
>45887_miR157:micropc
Length = 79
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 38 ttgacagaagatagagagcac 58
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>44895_miR157:micropc
Length = 98
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcacagatgatga 67
|||||||||||||||||||| |||||||
Sbjct: 1 tgacagaagatagagagcactaatgatga 29
>46632_miR157:micropc
Length = 144
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcac 58
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>46488_miR156:micropc
Length = 78
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 cagaagatagagagcacaga 61
||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacaga 20
>46109_miR157:micropc
Length = 78
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tgacagaagatagagagcac 58
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
