miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  153 bits (77), Expect = 3e-38
 Identities = 92/97 (94%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
           |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 1   tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 60

                                                
Query: 72  ctaagcttgagacagttattttgggacggagggagta 108
           |||||||||||||| ||||||||| ||||||||||||
Sbjct: 61  ctaagcttgagacacttattttggaacggagggagta 97



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 78  ttgagacagttattttgggacggagggagta 108
           ||||||||||||||||| |||||||||||||
Sbjct: 31  ttgagacagttattttgagacggagggagta 1



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
          ||||||||||||  |||||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaa 67




>45970_miR1439:micropc
          Length = 99

 Score =  123 bits (62), Expect = 3e-29
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                       
Query: 12  tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
           ||||||||||||| |||||||| ||| |||||||||||||||  ||||||||||||| ||
Sbjct: 98  tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39

                                                 
Query: 72  ctaagcttgagacagttattttgggacggagggagtac 109
           |||||||| ||| | |||||||||||||||||||||||
Sbjct: 38  ctaagcttaagagacttattttgggacggagggagtac 1



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 41 aactttgtactagctctagtacaaagttg 69
          |||||||||||||||||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 78  ttgagacagttattttgggacggagggagta 108
           |||| ||||||||||||||||||||||||||
Sbjct: 68  ttgatacagttattttgggacggagggagta 98



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 tactccctccgtctcaaaataagt 35
          ||||||||||||| ||||||||||
Sbjct: 2  tactccctccgtcccaaaataagt 25




>45205_miR1439:micropc
          Length = 99

 Score =  123 bits (62), Expect = 3e-29
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                       
Query: 12  tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
           ||||||||||||| |||||||| ||| |||||||||||||||  ||||||||||||| ||
Sbjct: 98  tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39

                                                 
Query: 72  ctaagcttgagacagttattttgggacggagggagtac 109
           |||||||| ||| | |||||||||||||||||||||||
Sbjct: 38  ctaagcttaagagacttattttgggacggagggagtac 1



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 41 aactttgtactagctctagtacaaagttg 69
          |||||||||||||||||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 78  ttgagacagttattttgggacggagggagta 108
           |||| ||||||||||||||||||||||||||
Sbjct: 68  ttgatacagttattttgggacggagggagta 98



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 tactccctccgtctcaaaataagt 35
          ||||||||||||| ||||||||||
Sbjct: 2  tactccctccgtcccaaaataagt 25




>45189_miR1439:micropc
          Length = 78

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 40/42 (95%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                     
Query: 67  ttgtactaagcttgagacagttattttgggacggagggagta 108
           |||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 36  ttgtactaag-ttgagacagttattttggaacggagggagta 76



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                 
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtac 50
          ||||||||||||  |||||||| ||||||||||| ||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaacttagtac 38




>46754_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
          ||||||||||||  || ||||  || ||||||||||||||| || |||||||||
Sbjct: 1  tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54




>46594_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
          ||||||||||||  || ||||  || ||||||||||||||| || |||||||||
Sbjct: 1  tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54




>46493_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
          ||||||||||||  || ||||  || ||||||||||||||| || |||||||||
Sbjct: 1  tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54




>46463_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
          ||||||||||||  || ||||  || ||||||||||||||| || |||||||||
Sbjct: 1  tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54




>46315_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
          ||||||||||||  || ||||  || ||||||||||||||| || |||||||||
Sbjct: 1  tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54