miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46679_miR1439:micropc
Length = 97
Score = 131 bits (66), Expect = 1e-31
Identities = 87/94 (92%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| |||| ||||||| ||| ||||||
Sbjct: 37 acaaagttgagacagttattttgagacggaggga 4
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtct 40
|||||||||||| ||||||||| |||||
Sbjct: 1 tactccctccgtctcaaaataactgtct 28
>45970_miR1439:micropc
Length = 99
Score = 99.6 bits (50), Expect = 5e-22
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||| |||||||||||||| || ||| |||||| |||||
Sbjct: 2 tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| |||| ||||||||||| ||||||
Sbjct: 62 acaaagttgatacagttattttgggacggaggga 95
>45205_miR1439:micropc
Length = 99
Score = 99.6 bits (50), Expect = 5e-22
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||| |||||||||||||| || ||| |||||| |||||
Sbjct: 2 tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| |||| ||||||||||| ||||||
Sbjct: 62 acaaagttgatacagttattttgggacggaggga 95
>45189_miR1439:micropc
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaa 54
||||||||||||| |||||||| ||||| || ||||||||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaa-cttagtacaa 36
