miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 65.9 bits (33), Expect = 6e-12
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                       
Query: 17 tactccctccgtcccataatataagagcgtttttgacactacact 61
          ||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacactacact 55



 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                 
Query: 16 gtactccctccgtcccataatataagagcgtttttgaca 54
          ||||||||||||||||||||||||||| | |||||||||
Sbjct: 17 gtactccctccgtcccataatataagaacatttttgaca 55




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 50/56 (89%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                  
Query: 17 tactccctccgtcccataatataagagcgtttttgacactacactagtgttaaaaa 72
          |||||||||| ||||||| |||||||| |||||| | ||||||||||||| |||||
Sbjct: 2  tactccctccttcccata-tataagagtgtttttaatactacactagtgtgaaaaa 56



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                              
Query: 22 cctccgtcccataatataagagcgtttttgacacta 57
          |||||||||||||||||||||  |||||| ||||||
Sbjct: 80 cctccgtcccataatataagaatgtttttcacacta 45




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 16  gtactccctccgtcccataatataag 41
           ||||||||||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataatataag 103




>41897_hvu-MIR1436:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 14 atgtactccctccgtcccataat 36
          |||||||||||||||||||||||
Sbjct: 89 atgtactccctccgtcccataat 67




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 17 tactccctccgtcccataatat 38
          ||||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataatat 33



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  tactccctccgtcccataat 36
           ||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 cctccgtcccataatataagag 43
          ||||||||||||||||||||||
Sbjct: 1  cctccgtcccataatataagag 22



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  cctccgtcccataatataag 41
           ||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataag 94