miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42655_tae-MIR1122:mirbase
          Length = 295

 Score =  127 bits (64), Expect = 2e-30
 Identities = 113/128 (88%), Gaps = 1/128 (0%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgtcctaaaattcttgtgttagatttgtctagatatgaatgtatctagtca 70
           |||||||||||||| |||| | |||  ||||||||||||| ||| | ||||||| |||||
Sbjct: 25  tactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtca 84

                                                                       
Query: 71  tattttagtatttagatacatccatttctagacaaatttaagacaagaattttgggacgg 130
           | |||||||||| |||||||||| | ||||||| ||| ||||||||||||||||||||||
Sbjct: 85  tgttttagtatt-agatacatccgtatctagactaatctaagacaagaattttgggacgg 143

                   
Query: 131 agggagta 138
           ||||||||
Sbjct: 144 agggagta 151



 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 11  tactccctccgtcctaaaattcttgtgttagatttgtctagatatgaatgtatcta 66
           |||||||||||||| ||||||||||| ||||||| ||||||||| | |||||||||
Sbjct: 151 tactccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatcta 96




>41879_far-MIR1122:mirbase
          Length = 300

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 67/81 (82%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 58  atgtatctagtcatattttagtatttagatacatccatttctagacaaatttaagacaag 117
           |||||||||  ||||||||||| | ||||||||||| | |||||| ||| || |||||  
Sbjct: 140 atgtatctaaacatattttagt-tgtagatacatccgtatctagaaaaagttgagacact 198

                                
Query: 118 aattttgggacggagggagta 138
            ||||| | ||||||||||||
Sbjct: 199 tatttttgtacggagggagta 219




>42275_osa-MIR1862e:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 attttgggacggagggagta 138
           ||||||||||||||||||||
Sbjct: 72  attttgggacggagggagta 91




>42274_osa-MIR1862d:mirbase
          Length = 150

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 attttgggacggagggagta 138
           ||||||||||||||||||||
Sbjct: 103 attttgggacggagggagta 122




>42271_osa-MIR1862a:mirbase
          Length = 88

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 attttgggacggagggagta 138
           ||||||||||||||||||||
Sbjct: 68  attttgggacggagggagta 87