miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 61 tcttatattatgggacggagggag 84
          ||||||||||||||||||||||||
Sbjct: 43 tcttatattatgggacggagggag 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          |||||||||| |||||||||||||
Sbjct: 18 tactccctccgtcccataatataa 41



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 61 tcttatattatgggacggagggag 84
          |||||||||||| |||||||||||
Sbjct: 74 tcttatattatgagacggagggag 97




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  cttatattatgggacggagggag 84
           |||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggag 125



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          ||||| ||||||||||||||||||
Sbjct: 15 tactctctccatcccataatataa 38



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  tactccctccatcccataatataa 34
           |||||||||| |||||||||||||
Sbjct: 127 tactccctccgtcccataatataa 104




>42225_osa-MIR1442:mirbase
          Length = 185

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 62  cttatattatgggacggagggaggagtata 91
           |||||||||||||||||| |||| ||||||
Sbjct: 141 cttatattatgggacggatggagtagtata 112




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 60 ctcttatattatgggacggagg 81
          ||||||||||||||||||||||
Sbjct: 22 ctcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  cttatattatgggacggagg 81
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 61 tcttatattatgggacggagg 81
          |||||||||||||||||||||
Sbjct: 60 tcttatattatgggacggagg 80




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 65 atattatgggacggagggag 84
          ||||||||||||||||||||
Sbjct: 33 atattatgggacggagggag 14




>42168_osa-MIR818e:mirbase
          Length = 225

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  cttatattatgggacggagg 81
           ||||||||||||||||||||
Sbjct: 206 cttatattatgggacggagg 225