miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42655_tae-MIR1122:mirbase
          Length = 295

 Score =  129 bits (65), Expect = 8e-31
 Identities = 102/113 (90%), Gaps = 1/113 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  ataagactttttagagattgcactataaactacatacggatatatatagacatattttag 94
           ||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 151 ataagtctttttagagattccactacaaactacatacggatgtatatagacatattttag 210

                                                                
Query: 95  agtgtacattcactcattttgttccgtatgtagtcgcctagtgaaatctctaa 147
           |||||| |||||||||||||  | ||||||||||| | ||||| |||||||||
Sbjct: 211 agtgtagattcactcattttacttcgtatgtagtc-catagtggaatctctaa 262




>42659_tae-MIR1126:mirbase
          Length = 164

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 137/167 (82%), Gaps = 4/167 (2%)
 Strand = Plus / Minus

                                                                       
Query: 12  tactccctccgttcctaaatataataagactttttagagattgcactataaactacatac 71
           ||||||||||||| ||||||||||   | |||| ||||||||  ||||| ||| ||||||
Sbjct: 163 tactccctccgtttctaaatataa---gtctttgtagagattttactatgaaccacatac 107

                                                                       
Query: 72  ggatatatatagacatattttagagtgtacattcactcattttgttccgtatgtagtcgc 131
           | || ||| ||||   ||||||||||||| ||||| | |||||| ||||||||||||| |
Sbjct: 106 gaatgtatgtagatgcattttagagtgtagattcatttattttgctccgtatgtagtc-c 48

                                                          
Query: 132 ctagtgaaatctctaaaatgtcttatattttgaaacggagggagtac 178
            ||||| ||| |||| || | ||||||||| | ||||||| ||||||
Sbjct: 47  atagtggaatttctataaagacttatatttaggaacggagagagtac 1



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 133 tagtgaaatctctaaaatgtcttatattttgaaacggagggagta 177
           |||| ||||||||| || | ||||||||| |||||||||||||||
Sbjct: 119 tagtaaaatctctacaaagacttatatttagaaacggagggagta 163



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 54/64 (84%), Gaps = 3/64 (4%)
 Strand = Plus / Plus

                                                                      
Query: 11 gtactccctccgttcctaaatataataagactttttagagattgcactataaactacata 70
          |||||| ||||||||||||||   ||||| |||| |||| ||| ||||||  ||||||||
Sbjct: 1  gtactctctccgttcctaaat---ataagtctttatagaaattccactatggactacata 57

              
Query: 71 cgga 74
          ||||
Sbjct: 58 cgga 61




>41896_hvu-MIR1126:mirbase
          Length = 104

 Score = 79.8 bits (40), Expect = 7e-16
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 74  atatatatagacatattttagagtgtacattcactcattttgttccgtatgtagtc 129
           ||||||||||||||| || ||||||||  |||||||||||||||||||||||||||
Sbjct: 76  atatatatagacataattcagagtgtaagttcactcattttgttccgtatgtagtc 21




>42112_osa-MIR806c:mirbase
          Length = 270

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 158 attttgaaacggagggagtaca 179
           ||||||||||||||||||||||
Sbjct: 37  attttgaaacggagggagtaca 16




>42076_osa-MIR441a:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 144 ctaaaatgtcttatattttgaaacggagggagta 177
           |||||||| |||| ||| ||||||||||||||||
Sbjct: 109 ctaaaatgacttacattgtgaaacggagggagta 142




>42670_tae-MIR1137:mirbase
          Length = 148

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 158 attttgaaacggagggagtacaag 181
           |||||| |||||||||||||||||
Sbjct: 47  attttggaacggagggagtacaag 24




>42116_osa-MIR806g:mirbase
          Length = 240

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 158 attttgaaacggagggagta 177
           ||||||||||||||||||||
Sbjct: 221 attttgaaacggagggagta 240