miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42655_tae-MIR1122:mirbase
          Length = 295

 Score =  109 bits (55), Expect = 8e-25
 Identities = 111/127 (87%), Gaps = 2/127 (1%)
 Strand = Plus / Minus

                                                                       
Query: 39  tccctccgtcccaaaattcttgtcttaagtttgtccaaaaatagatgtatctaaatacta 98
           |||||||||||||||||||||||||||  || ||| | | |  ||||||||||| |||||
Sbjct: 148 tccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatctaa-tacta 90

                                                                       
Query: 99  aaacgtgactagatacattcatatctagacaaatctaagacaagaatttttgggacggag 158
           |||| ||||| ||||||| | ||| |||||||||||||| ||| ||||||||||||||||
Sbjct: 89  aaacatgacttgatacatacgtatttagacaaatctaagccaa-aatttttgggacggag 31

                  
Query: 159 ggagtat 165
           |||||||
Sbjct: 30  ggagtat 24



 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 54/58 (93%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                     
Query: 108 tagatacattcatatctagacaaatctaagacaagaatttttgggacggagggagtat 165
           ||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 96  tagatacatccgtatctagactaatctaagacaagaa-ttttgggacggagggagtat 152




>42483_ssp-MIR1128:mirbase
          Length = 275

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 tttttgggacggagggagta 164
           ||||||||||||||||||||
Sbjct: 24  tttttgggacggagggagta 5




>42275_osa-MIR1862e:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 ttttgggacggagggagtat 165
           ||||||||||||||||||||
Sbjct: 73  ttttgggacggagggagtat 92




>42274_osa-MIR1862d:mirbase
          Length = 150

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 ttttgggacggagggagtat 165
           ||||||||||||||||||||
Sbjct: 104 ttttgggacggagggagtat 123




>42271_osa-MIR1862a:mirbase
          Length = 88

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 ttttgggacggagggagtat 165
           ||||||||||||||||||||
Sbjct: 69  ttttgggacggagggagtat 88