miRNEST 2.0, an integrative microRNA resource :: BLAST
>40397_ahy-MIR159:mirbase
Length = 197
Score = 383 bits (193), Expect = e-107
Identities = 196/197 (99%)
Strand = Plus / Plus
Query: 24 agtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctat 83
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 84 ggatcccacagtactacccatatataccccattatgcagtggtagttctgcggattccat 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatcccacagtactacccatatataccccattatgcagtggtagttctgcggattccat 120
Query: 144 atcctgggagcttcattacctttccacagatccttatttggattgaagggagctctacat 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcctgggagcttcattacctttccacagatccttatttggattgaagggagctctacat 180
Query: 204 agcatcctctttctaat 220
|||||||||||||||||
Sbjct: 181 agcatcctctttctaat 197
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 103 bits (52), Expect = 6e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 25 gtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatg 84
||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 85 gatcccacagtactacccat 104
||||||||||| ||||||||
Sbjct: 61 gatcccacagttctacccat 80
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 173 atccttatttggattgaagggagctctac 201
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 103 bits (52), Expect = 6e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 25 gtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatg 84
||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 85 gatcccacagtactacccat 104
||||||||||| ||||||||
Sbjct: 61 gatcccacagttctacccat 80
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 173 atccttatttggattgaagggagctctac 201
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>40338_rco-MIR159:mirbase
Length = 180
Score = 103 bits (52), Expect = 6e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||| |||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 83 tggatcccacag 94
||||||||||||
Sbjct: 61 tggatcccacag 72
Score = 60.0 bits (30), Expect = 8e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 150 ggagcttcattacctttccacagatccttatttggattgaagggagctctacat 203
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 125 ggagcttcattaccttgtattagatccttgtttggattgaagggagctctacat 178
>40432_gma-MIR159a:mirbase
Length = 214
Score = 97.6 bits (49), Expect = 4e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 24 agtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctat 83
|||||||||||||||||||||| |||| |||| |||||| ||||||||||| ||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 84 ggatcccacagtactacccat 104
|||||||||||| ||||||||
Sbjct: 79 ggatcccacagttctacccat 99
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 93.7 bits (47), Expect = 5e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 83 tggatcc 89
|||||||
Sbjct: 68 tggatcc 74
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctcta 200
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 93.7 bits (47), Expect = 5e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 83 tggatcc 89
|||||||
Sbjct: 68 tggatcc 74
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctcta 200
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 87.7 bits (44), Expect = 3e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| |||||||||| ||||| |||||||||||| | ||
Sbjct: 6 gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 65
Query: 83 tggatcccacag 94
||||||||||||
Sbjct: 66 tggatcccacag 77
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctctaca 202
|||||||| |||||||||||||||||||||||
Sbjct: 151 agatccttgtttggattgaagggagctctaca 182
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 71.9 bits (36), Expect = 2e-13
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||| | || || ||||| ||| |||||||| |||||
Sbjct: 8 gagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagcta 67
Query: 83 tggatcccacag 94
|| |||||||||
Sbjct: 68 tgaatcccacag 79
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctcta 200
||||| || |||||||||||||||||||||
Sbjct: 149 agatctttttttggattgaagggagctcta 178
>41218_csi-MIR159:mirbase
Length = 216
Score = 67.9 bits (34), Expect = 3e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggt-gggtggattgagctgctaagct 81
||||||||||||||||||||||| ||||| ||| | |||| ||||||||||| ||||
Sbjct: 9 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 68
Query: 82 atggatcccacagt 95
||||||||||||||
Sbjct: 69 atggatcccacagt 82
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctac 201
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>40435_gma-MIR159d:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 1e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 60 gggtggattgagctgctaagctatggatcccacagtactacccat 104
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctacat 203
||||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacat 175
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctacat 203
||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacat 206
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 agctgctaagctatggatccca 91
||||||||||||||||||||||
Sbjct: 66 agctgctaagctatggatccca 87
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctaca 202
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctaca 202
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 181 ttggattgaagggagctctaca 202
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41528_sly-MIR159:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tggagctccttgaagtccaaca 47
||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaaca 22
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctcta 200
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 agctgctaagctatggatccca 91
||||||||||||||||||||||
Sbjct: 48 agctgctaagctatggatccca 69
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 agctgctaagctatggatccca 91
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctac 201
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 agctgctaagctatggatccca 91
||||||||||||||||||||||
Sbjct: 60 agctgctaagctatggatccca 81
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 169 tttggattgaagggagctct 188
