miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                              
Query: 62 caaaaatgctcttatattatgggacggagggagtac 97
          |||||||| |||||||||||||||||||||||||||
Sbjct: 52 caaaaatgttcttatattatgggacggagggagtac 17



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 11 gtactccctccgttccataatataagaacgttttt 45
          ||||||||||||| ||||||||||||||| |||||
Sbjct: 17 gtactccctccgtcccataatataagaacattttt 51



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 71 tcttatattatgggacggagggagta 96
          |||||||||||| |||||||||||||
Sbjct: 74 tcttatattatgagacggagggagta 99




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 72  cttatattatgggacggagggagtact 98
           |||||||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagtact 129



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 11  gtactccctccgttccataatataag 36
           ||||||||||||| ||||||||||||
Sbjct: 128 gtactccctccgtcccataatataag 103




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 17 cctccgttccataatataagaacgtttttca 47
          ||||||| |||||||||||||| ||||||||
Sbjct: 80 cctccgtcccataatataagaatgtttttca 50



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 71 tcttatattatgggacggagg 91
          |||||||||||||||||||||
Sbjct: 60 tcttatattatgggacggagg 80




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 75 atattatgggacggagggagta 96
          ||||||||||||||||||||||
Sbjct: 33 atattatgggacggagggagta 12



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  attatgggacggagggagta 96
           ||||||||||||||||||||
Sbjct: 123 attatgggacggagggagta 142




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 70 ctcttatattatgggacggagg 91
          ||||||||||||||||||||||
Sbjct: 22 ctcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  cttatattatgggacggagg 91
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113