miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42668_tae-MIR1135:mirbase
          Length = 109

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                       
Query: 31  tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
           ||||| |||||| ||||| ||||||||  |||||| ||||||||||||||||||||||||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgtattttagtt 49

                     
Query: 91  ctagatacat 100
           ||||||||||
Sbjct: 48  ctagatacat 39



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 113 atttctgcgacaagtaattccggacggagggagta 147
           |||||||||||||||||||||| ||||||||||||
Sbjct: 74  atttctgcgacaagtaattccgaacggagggagta 108




>42660_tae-MIR1127:mirbase
          Length = 150

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 94/110 (85%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                       
Query: 38  tccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagttctagata 97
           ||||| ||||| |||| |||  ||||||  ||||||||| | | ||||||||| ||||||
Sbjct: 26  tccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagttgtagata 85

                                                             
Query: 98  cattcatttttattcatttctgcgacaagtaattccggacggagggagta 147
           ||| ||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 86  catccatttttat-catttttgtgacaagtaattccgaacggagggagta 134




>42661_tae-MIR1128:mirbase
          Length = 190

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 73/84 (86%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                       
Query: 66  ggatgtatctagacgtattttagttctagatacat--tcatttttattcatttctgcgac 123
           ||||||||||||| |||||||||||||||||||||   | |||||||||||||    |||
Sbjct: 117 ggatgtatctagatgtattttagttctagatacatccccttttttattcattttgatgac 58

                                   
Query: 124 aagtaattccggacggagggagta 147
           ||||| || |||||||||||||||
Sbjct: 57  aagtattttcggacggagggagta 34



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 31 tactctctccgtccggaaatacttgtca 58
          ||||| ||||||||| ||||||||||||
Sbjct: 34 tactccctccgtccgaaaatacttgtca 61




>42669_tae-MIR1136:mirbase
          Length = 107

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 31  tactctctccgtccggaaatacttgtcagagaaatggatgtatctagacgtattttagtt 90
           ||||| |||||| | ||| ||||||||  ||  ||||||||||||||| |||||||||||
Sbjct: 1   tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 60

                           
Query: 91  ctagatacattcattt 106
           ||| |||||| |||||
Sbjct: 61  ctaaatacatccattt 76



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 117 ctgcgacaagtaattccggacggagggagta 147
           |||||||||||||||| | ||||||||||||
Sbjct: 31  ctgcgacaagtaattcggaacggagggagta 1




>41833_bdi-MIR5164:mirbase
          Length = 166

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 134 ggacggagggagtactagtaatcc 157
           ||||||||||||||||||| ||||
Sbjct: 45  ggacggagggagtactagttatcc 22