miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 77/89 (86%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 37  gtgtgcctggctccctgtatgccatttgtagagcacatcaccacggtgatg-gcctaatg 95
           |||||||||||||||||||||||||||||||||  |||||| || ||||||  | || ||
Sbjct: 3   gtgtgcctggctccctgtatgccatttgtagagtccatcacgacagtgatgaacttagtg 62

                                        
Query: 96  aatggcgtacaaggagccaagcatgctgt 124
           ||||||||||  |||| || |||||||||
Sbjct: 63  aatggcgtactcggagtcatgcatgctgt 91




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 38 tgtgcctggctccctgtatgccatttgtagagcacatc 75
          ||||||||||||||||||||||||||||||||| ||||
Sbjct: 19 tgtgcctggctccctgtatgccatttgtagagctcatc 56




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  gtgcctggctccctgtatgccatttgtagagcacatcaccacggtgatggc-ctaatgaa 97
           |||||||||||||||||||||||||||||||  |||||  | | ||||| |  |||||||
Sbjct: 20  gtgcctggctccctgtatgccatttgtagagttcatcaagatgttgatgactttaatgaa 79

                                        
Query: 98  tggcgtacaaggagccaagcatgctgtgt 126
           |||||| | |||||||| ||||| |||||
Sbjct: 80  tggcgtgcgaggagccatgcatgttgtgt 108




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 35 ttgtgtgcctggctccctgtatgccatttgt 65
          |||||||||||||||||||||||||||||||
Sbjct: 1  ttgtgtgcctggctccctgtatgccatttgt 31




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 38 tgtgcctggctccctgtatgccatttgtagagc 70
          ||||||||||||||||||||||||||| |||||
Sbjct: 9  tgtgcctggctccctgtatgccatttgcagagc 41




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 38 tgtgcctggctccctgtatgccatttgtagagc 70
          ||||||||||||||||||||||||||| |||||
Sbjct: 9  tgtgcctggctccctgtatgccatttgcagagc 41




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 38 tgtgcctggctccctgtatgccatttgtagag 69
          ||||||||||||||||||||||||||| ||||
Sbjct: 31 tgtgcctggctccctgtatgccatttgcagag 62




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 40 tgcctggctccctgtatgccatttgtagagc 70
          ||||||||||||||||||||||||| |||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagc 41




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 34 tttgtgtgcctggctccctgtatgccatttg 64
          ||||| |||||||||||||||||||||||||
Sbjct: 15 tttgtatgcctggctccctgtatgccatttg 45




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 36 tgtgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||||
Sbjct: 17 tgtgtgcctggctccctgtatgcca 41



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 98  tggcgtacaaggagccaagcatgc 121
           |||||| |||||||||||||||||
Sbjct: 81  tggcgtgcaaggagccaagcatgc 104




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 40 tgcctggctccctgtatgccatttg 64
          |||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttg 35




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 40 tgcctggctccctgtatgccatttg 64
          |||||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccatttg 44




>41312_ptc-MIR160h:mirbase
          Length = 98

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 36 tgtgtgcctggctccctgtatgccatttg 64
          |||||||||||||||||| ||||||||||
Sbjct: 7  tgtgtgcctggctccctgcatgccatttg 35




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 40 tgcctggctccctgtatgccatttg 64
          |||||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccatttg 25




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 36 tgtgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||||
Sbjct: 10 tgtgtgcctggctccctgtatgcca 34




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 37 gtgtgcctggctccctgtatgcca 60
          ||||||||||||||||||||||||
Sbjct: 1  gtgtgcctggctccctgtatgcca 24



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 98  tggcgtacaaggagccaagcatgc 121
           |||||| |||||||||||||||||
Sbjct: 65  tggcgtgcaaggagccaagcatgc 88




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 38 tgtgcctggctccctgtatgccat 61
          ||||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgccat 27




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 38 tgtgcctggctccctgtatgccat 61
          ||||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgccat 27




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 38 tgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgcca 27




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 38 tgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||
Sbjct: 7  tgtgcctggctccctgtatgcca 29




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 38 tgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgcca 27




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 38 tgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgcca 51




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 38 tgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgcca 51



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 98  tggcgtacaaggagccaagcatgc 121
           |||||| |||||||||||||||||
Sbjct: 94  tggcgtgcaaggagccaagcatgc 117




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 38 tgtgcctggctccctgtatgcca 60
          |||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgcca 31




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 98  tggcgtacaaggagccaagcatg 120
           |||||||||||||||||||||||
Sbjct: 83  tggcgtacaaggagccaagcatg 105



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgcca 44




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 gtgcctggctccctgtatgcca 60
          ||||||||||||||||||||||
Sbjct: 9  gtgcctggctccctgtatgcca 30




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 gtgcctggctccctgtatgcca 60
          ||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgcca 50



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 98  tggcgtacaaggagccaagcatgc 121
           |||||| |||||||||||||||||
Sbjct: 91  tggcgtgcaaggagccaagcatgc 114




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 gtgcctggctccctgtatgcca 60
          ||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgcca 51



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 98  tggcgtacaaggagccaagcatgc 121
           |||||| |||||||||||||||||
Sbjct: 92  tggcgtgcaaggagccaagcatgc 115




>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 40 tgcctggctccctgtatgccat 61
          ||||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgccat 47




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 gtgcctggctccctgtatgcca 60
          ||||||||||||||||||||||
Sbjct: 4  gtgcctggctccctgtatgcca 25




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 40 tgcctggctccctgtatgccat 61
          ||||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgccat 25




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 gtgcctggctccctgtatgcca 60
          ||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 40 tgcctggctccctgtatgccat 61
          ||||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgccat 63




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 40 tgcctggctccctgtatgccat 61
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 40 tgcctggctccctgtatgccat 61
          ||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 2  tgcctggctccctgtatgcca 22




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgcca 29




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgcca 42




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 8  tgcctggctccctgtatgcca 28




>41869_far-MIR160:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgcca 73




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgcca 52




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tgcctggctccctgtatgcca 60
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31