miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41578_vvi-MIR162:mirbase
          Length = 103

 Score = 79.8 bits (40), Expect = 4e-16
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                      
Query: 12 tgaagtcactggaggcagcggttcatcgatctcttcctgaaatt 55
          ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1  tgaagtcactggatgcagcggttcatcgatctcttcctgaaatt 44




>40437_gma-MIR162:mirbase
          Length = 102

 Score = 75.8 bits (38), Expect = 7e-15
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                    
Query: 11 gtgaagtcactggaggcagcggttcatcgatctcttcctgaa 52
          |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1  gtgaagtcactggatgcagcggttcatcgatctcttcctgaa 42



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 90  cgataaacctctgcatccagcgctc 114
           |||||||||||||||||||||||||
Sbjct: 74  cgataaacctctgcatccagcgctc 98




>40329_cpa-MIR162a:mirbase
          Length = 109

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 14 aagtcactggaggcagcggttcatcgatctcttcctg 50
          |||||||||||||||||||||||||||||||||||||
Sbjct: 7  aagtcactggaggcagcggttcatcgatctcttcctg 43




>41046_ghr-MIR162a:mirbase
          Length = 148

 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 86/98 (87%), Gaps = 5/98 (5%)
 Strand = Plus / Plus

                                                                       
Query: 18  cactggaggcagcggttcatcgatctcttcctga-aatttggctgtg-gaatcctacaca 75
           |||||||||||||||||||||||||||||||||| ||||| | |||| ||||   |||||
Sbjct: 22  cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaat--aacaca 79

                                                 
Query: 76  aa-gcaagaatcgggcgataaacctctgcatccagcgc 112
           ||  || ||||||  |||||||||||||||||||||||
Sbjct: 80  aatacatgaatcgatcgataaacctctgcatccagcgc 117




>41313_ptc-MIR162a:mirbase
          Length = 107

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctg 50
          |||| |||||||||||||||||||||||||||||||||
Sbjct: 4  gaagacactggaggcagcggttcatcgatctcttcctg 41



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 90  cgataaacctctgcatccagcgct 113
           ||||||||||||||||||||||||
Sbjct: 79  cgataaacctctgcatccagcgct 102




>40342_rco-MIR162:mirbase
          Length = 101

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 17 tcactggaggcagcggttcatcgatctcttcctg 50
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  tcactggaggcagcggttcatcgatctcttcctg 34




>41090_tcc-MIR162:mirbase
          Length = 131

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 18 cactggaggcagcggttcatcgatctcttcctg 50
          |||||||||||||||||||||||||||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctg 51




>40663_mtr-MIR162:mirbase
          Length = 124

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 83/99 (83%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                       
Query: 16  gtcactggaggcagcggttcatcgatctcttcctgaaatttggctgtggaatcctacaca 75
           ||||||||| |||||||||||||||||| |||||||| ||||  |||    || || |  
Sbjct: 17  gtcactggatgcagcggttcatcgatctgttcctgaattttgtttgt---ctcgtaaaac 73

                                                  
Query: 76  aagcaagaatcgggcgataaacctctgcatccagcgctc 114
           || || ||||||| |||||||||||||||||||||||||
Sbjct: 74  aaacatgaatcggtcgataaacctctgcatccagcgctc 112




>41315_ptc-MIR162c:mirbase
          Length = 107

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                  
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
          |||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4  gaagacactggaggcagcggttcatcgatcttttcctgaa 43



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  cgataaacctctgcatccag 109
           ||||||||||||||||||||
Sbjct: 79  cgataaacctctgcatccag 98




>41314_ptc-MIR162b:mirbase
          Length = 107

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                  
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
          |||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4  gaagacactggaggcagcggttcatcgatcttttcctgaa 43



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  cgataaacctctgcatccag 109
           ||||||||||||||||||||
Sbjct: 79  cgataaacctctgcatccag 98




>41220_csi-MIR162:mirbase
          Length = 201

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 11  gtgaagtcactggaggcagcggttcatcgatc 42
           ||||||||||||||||||||||||||||||||
Sbjct: 80  gtgaagtcactggaggcagcggttcatcgatc 111




>40024_ath-MIR162a:mirbase
          Length = 140

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 15 agtcactggaggcagcggttcatcgatctcttcctg 50
          |||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  cgataaacctctgcatccagcg 111
           ||||||||||||||||||||||
Sbjct: 90  cgataaacctctgcatccagcg 111




>39812_aly-MIR162a:mirbase
          Length = 228

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 15 agtcactggaggcagcggttcatcgatctcttcctg 50
          |||| |||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  cgataaacctctgcatccagcg 111
           ||||||||||||||||||||||
Sbjct: 137 cgataaacctctgcatccagcg 158




>40025_ath-MIR162b:mirbase
          Length = 111

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 75  aaagcaagaatcgggcgataaacctctgcatccagcgct 113
           |||||||||||||  ||||||||||||||||||||||||
Sbjct: 65  aaagcaagaatcgatcgataaacctctgcatccagcgct 103



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 11 gtgaagtcactggaggcagcggttcatcgatc 42
          |||||||| |||||||||||||||||||||||
Sbjct: 3  gtgaagtcgctggaggcagcggttcatcgatc 34




>39813_aly-MIR162b:mirbase
          Length = 184

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 11 gtgaagtcactggaggcagcggttcatcgatc 42
          |||||||| |||||||||||||||||||||||
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatc 72



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 75  aaagcaagaatcgggcgataaacctctgcatccagcgct 113
           |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 99  aaagcatgaatcgatcgataaacctctgcatccagcgct 137




>42708_zma-MIR162:mirbase
          Length = 130

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 82  gaatcgggcgataaacctctgcatccag 109
           ||||||| ||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130




>41530_sly-MIR162:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 82  gaatcgggcgataaacctctgcatccag 109
           ||||||| ||||||||||||||||||||
Sbjct: 72  gaatcggtcgataaacctctgcatccag 99




>42502_sbi-MIR162:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  cgataaacctctgcatccag 109
           ||||||||||||||||||||
Sbjct: 108 cgataaacctctgcatccag 127




>41929_osa-MIR162a:mirbase
          Length = 171

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  cgataaacctctgcatccag 109
           ||||||||||||||||||||
Sbjct: 144 cgataaacctctgcatccag 163