miRNEST 2.0, an integrative microRNA resource :: BLAST
>41101_tcc-MIR168:mirbase
Length = 167
Score = 85.7 bits (43), Expect = 1e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 125 cgaattggatcccgccttgcatcaactgaatcggagaccgcgg 167
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagaccgcgg 159
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggctgtctctaattcgcttggtgcaggtcgggaactgatt 42
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6 ccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
>41215_crt-MIR168:mirbase
Length = 201
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 124 gcgaattggatcccgccttgcatcaactgaatcggagaccg 164
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcggagaccg 172
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggctgtctctaattcgcttggtgcaggtcgggaactgatt 42
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6 ccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
>41210_ccl-MIR168:mirbase
Length = 176
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 124 gcgaattggatcccgccttgcatcaactgaatcggagaccg 164
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcggagaccg 171
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggctgtctctaattcgcttggtgcaggtcgggaactgatt 42
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5 ccggcggtctctaattcgcttggtgcaggtcgggaactgatt 46
>40448_gma-MIR168:mirbase
Length = 125
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 125 cgaattggatcccgccttgcatcaactgaatcggagaccgcgg 167
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcggaggccgcgg 120
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 7 gtctctaattcgcttggtgcaggtcgggaac 37
|||||||||||||||||||||||||||||||
Sbjct: 10 gtctctaattcgcttggtgcaggtcgggaac 40
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 75.8 bits (38), Expect = 9e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 123 agcgaattggatcccgccttgcatcaactgaatcggag 160
||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agcgaattggatcccgccttgcatcaactgaatcggag 159
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 7 gtctctaattcgcttggtgcaggtcgggaactgatt 42
|||||| |||||||||||||||||||||||||||||
Sbjct: 2 gtctctgattcgcttggtgcaggtcgggaactgatt 37
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 7 gtctctaattcgcttggtgcaggtcgggaactgatt 42
||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtctctaattcgcttggtgcaggtcgggaactgatt 37
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 126 gaattggatcccgccttgcatcaactgaatcggaga 161
||||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggaga 136
>39833_aly-MIR168b:mirbase
Length = 176
Score = 67.9 bits (34), Expect = 2e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 ccggctgtctctaattcgcttggtgcaggtcgggaactgattagct 46
||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 28 ccggcggtctcggattcgcttggtgcaggtcgggaactgattagct 73
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 132 gatcccgccttgcatcaactgaatcggag 160
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>40355_rco-MIR168:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 11 ctaattcgcttggtgcaggtcgggaactgattagctt 47
|||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaactgattggctt 37
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 126 gaattggatcccgccttgcatcaactgaatcg 157
||||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatcg 128
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 128 attggatcccgccttgcatcaactgaatcgga 159
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 attcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 128 attggatcccgccttgcatcaactgaatcgga 159
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 attcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45
>41596_vvi-MIR168:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 7 gtctctaattcgcttggtgcaggtcgggaac 37
|||||||||||||||||||||||||||||||
Sbjct: 2 gtctctaattcgcttggtgcaggtcgggaac 32
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 132 gatcccgccttgcatcaactgaatcggagac 162
|||||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>40044_ath-MIR168b:mirbase
Length = 124
Score = 60.0 bits (30), Expect = 6e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ccggctgtctctaattcgcttggtgcaggtcgggaactgatt 42
||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 4 ccggcggtctcggattcgcttggtgcaggtcgggaactgatt 45
>40271_bna-MIR168:mirbase
Length = 133
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaactgatt 42
|||||||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgatt 44
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 ggatcccgccttgcatcaactgaatcggag 160
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
