miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40338_rco-MIR159:mirbase
          Length = 180

 Score =  123 bits (62), Expect = 8e-29
 Identities = 82/88 (93%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                       
Query: 151 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 210
           |||||||||||||||||||||||||||| |||||||||||||||| |    |||||||||
Sbjct: 96  ttggataggcttgtggcttgcatatctcaggagcttcattaccttgta---ttagatcct 152

                                       
Query: 211 tgtttggattgaagggagctctacatct 238
           ||||||||||||||||||||||||||||
Sbjct: 153 tgtttggattgaagggagctctacatct 180



 Score =  121 bits (61), Expect = 3e-28
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctat 97
           ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 2   agtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctat 61

                            
Query: 98  ggataccacagccctat 114
           |||| ||||||||||||
Sbjct: 62  ggatcccacagccctat 78




>41572_vvi-MIR159c:mirbase
          Length = 190

 Score =  103 bits (52), Expect = 7e-23
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctat 97
           ||||||||||||| |||||||||||||| |||| | |||||||||||||||||||  |||
Sbjct: 7   agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66

                               
Query: 98  ggataccacagccctatccc 117
           |||| |||||||||||||||
Sbjct: 67  ggatcccacagccctatccc 86



 Score = 93.7 bits (47), Expect = 7e-20
 Identities = 76/85 (89%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                       
Query: 151 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 210
           |||||||||||||||||||||||||||| |||||| ||||| |  | |   |||||||||
Sbjct: 101 ttggataggcttgtggcttgcatatctcaggagctgcattatccaagt---ttagatcct 157

                                    
Query: 211 tgtttggattgaagggagctctaca 235
           |||||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctctaca 182




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 93.7 bits (47), Expect = 7e-20
 Identities = 78/87 (89%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 29  gggttaagaagtggagctccttaaagtccaatagaggatcttgca-gggtagattgagct 87
           |||||||| ||||||||||||| |||||||| ||||| ||| ||| ||||| ||||||||
Sbjct: 1   gggttaaggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagct 60

                                      
Query: 88  gctgagctatggataccacagccctat 114
           |||||||||||||| |||||| |||||
Sbjct: 61  gctgagctatggatcccacagtcctat 87



 Score = 63.9 bits (32), Expect = 6e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 154 gataggcttgtggcttgcatatctctggagcttcattacc 193
           |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacc 164




>41301_ptc-MIR159c:mirbase
          Length = 183

 Score = 91.7 bits (46), Expect = 3e-19
 Identities = 71/78 (91%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctat 97
           ||||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||
Sbjct: 9   agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68

                             
Query: 98  ggataccacagccctatc 115
           |||| |||||| ||||||
Sbjct: 69  ggat-ccacagtcctatc 85



 Score = 69.9 bits (35), Expect = 1e-12
 Identities = 70/81 (86%), Gaps = 3/81 (3%)
 Strand = Plus / Plus

                                                                       
Query: 153 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 212
           ||||||| ||| |||||||||||||| ||||||| ||| ||| ||   ||||||||| | 
Sbjct: 97  ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153

                                
Query: 213 tttggattgaagggagctcta 233
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>41300_ptc-MIR159b:mirbase
          Length = 187

 Score = 91.7 bits (46), Expect = 3e-19
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctat 97
           ||||||||||||| |||||||||||| | || ||| |||||||| |||||||||||||||
Sbjct: 9   agtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctat 68

                             
Query: 98  ggataccacagccctatc 115
           | || |||||||||||||
Sbjct: 69  gaatcccacagccctatc 86



 Score = 69.9 bits (35), Expect = 1e-12
 Identities = 61/69 (88%), Gaps = 3/69 (4%)
 Strand = Plus / Plus

                                                                       
Query: 165 ggcttgcatatctctggagcttcattaccttattatgttagatccttgtttggattgaag 224
           |||||||||||||| ||||||| ||||||| ||   |||||||| || ||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaat---gttagatctttttttggattgaag 169

                    
Query: 225 ggagctcta 233
           |||||||||
Sbjct: 170 ggagctcta 178




>41299_ptc-MIR159a:mirbase
          Length = 183

 Score = 91.7 bits (46), Expect = 3e-19
 Identities = 71/78 (91%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctat 97
           ||||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||
Sbjct: 9   agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68

                             
Query: 98  ggataccacagccctatc 115
           |||| |||||| ||||||
Sbjct: 69  ggat-ccacagtcctatc 85



 Score = 69.9 bits (35), Expect = 1e-12
 Identities = 70/81 (86%), Gaps = 3/81 (3%)
 Strand = Plus / Plus

                                                                       
Query: 153 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 212
           ||||||| ||| |||||||||||||| ||||||| ||| ||| ||   ||||||||| | 
Sbjct: 97  ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153

                                
Query: 213 tttggattgaagggagctcta 233
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 85.7 bits (43), Expect = 2e-17
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctat 97
           ||||||||||||| |||||||| ||||| |||||  ||||||||||||||||| ||||||
Sbjct: 1   agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60

                      
Query: 98  ggataccacag 108
           |||| ||||||
Sbjct: 61  ggatcccacag 71



 Score = 58.0 bits (29), Expect = 4e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 204 agatccttgtttggattgaagggagctctacat 236
           |||||||| ||||||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctctacat 180




>41024_pvu-MIR159a:mirbase
          Length = 174

 Score = 83.8 bits (42), Expect = 6e-17
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 39  gtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatg 98
           |||||||||||| ||||||||| ||||||||| | |||| |||||||||||| |||||||
Sbjct: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                     
Query: 99  gataccacag 108
           ||| ||||||
Sbjct: 61  gatcccacag 70



 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 206 atccttgtttggattgaagggagctctac 234
           |||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score = 83.8 bits (42), Expect = 6e-17
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 39  gtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatg 98
           |||||||||||| ||||||||| ||||||||| | |||| |||||||||||| |||||||
Sbjct: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                     
Query: 99  gataccacag 108
           ||| ||||||
Sbjct: 61  gatcccacag 70



 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 206 atccttgtttggattgaagggagctctac 234
           |||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174




>40432_gma-MIR159a:mirbase
          Length = 214

 Score = 81.8 bits (41), Expect = 3e-16
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 36  gaagtggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagct 95
           ||||||||||||||| ||||||||| ||||||||| | ||||  ||||||||||| ||||
Sbjct: 17  gaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagct 76

                        
Query: 96  atggataccacag 108
           |||||| ||||||
Sbjct: 77  atggatcccacag 89



 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 208 ccttgtttggattgaagggagctctaca 235
           |||| |||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197




>41528_sly-MIR159:mirbase
          Length = 177

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 40  tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 99
           ||||||||||| |||||||| | |  ||||  |||| || ||||||||||||| ||||||
Sbjct: 1   tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60

                           
Query: 100 ataccacagccctatc 115
           || || ||||||||||
Sbjct: 61  attcctcagccctatc 76



 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 200 tgttagatccttgtttggattgaagggagctcta 233
           |||| |||| || |||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctcta 177




>40657_mtr-MIR159a:mirbase
          Length = 183

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           ||||||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacatct 177




>39804_aly-MIR159a:mirbase
          Length = 222

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           ||||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacatct 208




>42691_zma-MIR159b:mirbase
          Length = 221

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 211 tgtttggattgaagggagctctacatct 238
           |||||||||||||||||||||| |||||
Sbjct: 180 tgtttggattgaagggagctctgcatct 207




>41883_hvu-MIR159b:mirbase
          Length = 122

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 211 tgtttggattgaagggagctctacatct 238
           |||||||||||||||||||||| |||||
Sbjct: 9   tgtttggattgaagggagctctgcatct 36




>40311_bra-MIR159a:mirbase
          Length = 185

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 213 tttggattgaagggagctctaca 235
           |||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185




>40261_bna-MIR159:mirbase
          Length = 183

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 213 tttggattgaagggagctctaca 235
           |||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183




>42700_zma-MIR159k:mirbase
          Length = 200

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 211 tgtttggattgaagggagctct 232
           ||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198




>42699_zma-MIR159j:mirbase
          Length = 252

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 211 tgtttggattgaagggagctct 232
           ||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250




>42635_tae-MIR159b:mirbase
          Length = 255

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           |||||||||||||||||||| |||||
Sbjct: 230 tttggattgaagggagctctgcatct 255




>42634_tae-MIR159a:mirbase
          Length = 177

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 211 tgtttggattgaagggagctct 232
           ||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173




>41922_osa-MIR159f:mirbase
          Length = 188

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 214 ttggattgaagggagctctaca 235
           ||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180




>41918_osa-MIR159b:mirbase
          Length = 188

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           |||||||||||||||||||| |||||
Sbjct: 158 tttggattgaagggagctctgcatct 183




>41917_osa-MIR159a:mirbase
          Length = 272

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           |||||||||||||||||||| |||||
Sbjct: 242 tttggattgaagggagctctgcatct 267




>41916_osa-MIR159a:mirbase
          Length = 272

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           |||||||||||||||||||| |||||
Sbjct: 242 tttggattgaagggagctctgcatct 267




>41882_hvu-MIR159a:mirbase
          Length = 178

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 211 tgtttggattgaagggagctct 232
           ||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175




>41868_far-MIR159:mirbase
          Length = 200

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           |||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctctgcatct 194




>40017_ath-MIR159b:mirbase
          Length = 196

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 213 tttggattgaagggagctctacatct 238
           |||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193




>40016_ath-MIR159a:mirbase
          Length = 184

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 213 tttggattgaagggagctctac 234
           ||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184