miRNEST 2.0, an integrative microRNA resource :: BLAST
>40385_rco-MIR399c:mirbase
Length = 96
Score = 61.9 bits (31), Expect = 9e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 64 gcattcctatagtgtgctccatgccaaaggagatttgcccggc 106
|||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 50 gcattcctatcgtgtgcatcatgccaaaggagatttgcccggc 92
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 6 ttacagggcaaaacctccattggcatgcagccacactaagat 47
|||||||||||||||| ||||||||||| |||| ||||||||
Sbjct: 1 ttacagggcaaaaccttcattggcatgctgccagactaagat 42
>41457_ptc-MIR399j:mirbase
Length = 112
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 2 tgcattacagggcaaaacctccattggcatgcagccac 39
||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 tgcattacagggcaagacctccattggcaggcagccac 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
|||||||||||||||| |||||||
Sbjct: 82 tgccaaaggagatttgtccggcaa 105
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 82 ccatgccaaaggagatttgcccggcaa 108
|||||||||||||||||||||||||||
Sbjct: 94 ccatgccaaaggagatttgcccggcaa 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 ttgcattacagggcaaaacctccattggcatgcagccac 39
|||||||||||||||| | |||||||||||||||||||
Sbjct: 8 ttgcattacagggcaag-cttccattggcatgcagccac 45
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 82 ccatgccaaaggagatttgcccggcaa 108
|||||||||||||||||||||||||||
Sbjct: 94 ccatgccaaaggagatttgcccggcaa 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 ttgcattacagggcaaaacctccattggcatgcagccac 39
|||||||||||||||| | |||||||||||||||||||
Sbjct: 8 ttgcattacagggcaag-cttccattggcatgcagccac 45
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 52.0 bits (26), Expect = 9e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 63 tgcattcctatagtgtgctccatgccaaaggagatttgcccggcaa 108
||||||| | |||||||| | ||||||||||||||||||||||||
Sbjct: 60 tgcattcttgtagtgtgccctctgccaaaggagatttgcccggcaa 105
>40384_rco-MIR399b:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 72 atagtgtgctccatgccaaaggagatttgcccggcaa 108
|||||||| || ||||||||||||||||||||||||
Sbjct: 68 atagtgtgtgccctgccaaaggagatttgcccggcaa 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 ttacagggcaaaacctccattggcatg 32
||||||||||||| |||||||||||||
Sbjct: 1 ttacagggcaaaatctccattggcatg 27
>41246_csi-MIR399a:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||||||||
Sbjct: 114 tgccaaaggagatttgcccggcaa 137
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||||||||
Sbjct: 96 tgccaaaggagatttgcccggcaa 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 1 ttgcattacagggcaaa-acctccattggcatgcagccac 39
||||||||||||||||| | ||||||||||| || |||||
Sbjct: 13 ttgcattacagggcaaagatctccattggcaggctgccac 52
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||||||||
Sbjct: 95 tgccaaaggagatttgcccggcaa 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2 tgcattacagggcaaaacctccattggcatgcagccac 39
||||||||||||||| | |||||||||| ||||||||
Sbjct: 14 tgcattacagggcaagatttccattggcaggcagccac 51
>40299_bna-MIR399:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccgg 105
|||||||||||||||||||||
Sbjct: 81 tgccaaaggagatttgcccgg 101
>40097_ath-MIR399f:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccgg 105
|||||||||||||||||||||
Sbjct: 88 tgccaaaggagatttgcccgg 108
>39893_aly-MIR399j:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccgg 105
|||||||||||||||||||||
Sbjct: 96 tgccaaaggagatttgcccgg 116
>39891_aly-MIR399h:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccgg 105
|||||||||||||||||||||
Sbjct: 82 tgccaaaggagatttgcccgg 102
>39884_aly-MIR399a:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccgg 105
|||||||||||||||||||||
Sbjct: 113 tgccaaaggagatttgcccgg 133
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 81 tgccaaaggagatttgcccagcaa 104
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 87 tgccaaaggagatttgcccagcaa 110
>42046_osa-MIR399f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 87 tgccaaaggagatttgcccagcaa 110
>42045_osa-MIR399e:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 88 tgccaaaggagatttgcccagcaa 111
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 91 tgccaaaggagatttgccccgcaa 114
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 77 tgccaaaggagatttgccccgcaa 100
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 79 tgccaaaggagatttgcccagcaa 102
>40387_rco-MIR399e:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 83 tgccaaaggagatttgcccagcaa 106
>40095_ath-MIR399d:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 70 tgccaaaggagatttgccccgcaa 93
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 92 tgccaaaggagatttgccccgcaa 115
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 111 tgccaaaggagatttgccccgcaa 134
>39887_aly-MIR399d:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 84 tgccaaaggagatttgccccgcaa 107
