miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41668_vvi-MIR399a:mirbase
          Length = 97

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 91  ctgccaaaggagaattgccctgttattcaa 120
           ||||||||||||||||||||||||||||||
Sbjct: 66  ctgccaaaggagaattgccctgttattcaa 95



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 20 agaatatcagtgcgattctcctttggcag 48
          |||||| ||||| ||||||||||||||||
Sbjct: 2  agaataacagtgtgattctcctttggcag 30




>41150_tcc-MIR399e:mirbase
          Length = 117

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 93  gccaaaggagaattgccctgttattcaactacactac 129
           ||||||||||||||||||||  |||||||||| ||||
Sbjct: 78  gccaaaggagaattgccctgccattcaactactctac 114



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 91  ctgccaaaggagaattgccctgttattc 118
           |||||||||||||||||| |||||||||
Sbjct: 40  ctgccaaaggagaattgcgctgttattc 13



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                 
Query: 10 agggtagtgaagaatatcagtgcgattctcctttggcag 48
          ||||||| |||||||| ||| || |||||||||||||||
Sbjct: 2  agggtagagaagaataacagcgcaattctcctttggcag 40




>41454_ptc-MIR399g:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 91  ctgccaaaggagaattgccctgttattcaac 121
           ||||||||||||||||||||||  |||||||
Sbjct: 64  ctgccaaaggagaattgccctgccattcaac 94



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 91  ctgccaaaggagaattgccctgttattca 119
           |||||||||||||||||| | ||||||||
Sbjct: 32  ctgccaaaggagaattgcacagttattca 4




>42596_sbi-MIR399h:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  ctgccaaaggagaattgccctg 112
           ||||||||||||||||||||||
Sbjct: 92  ctgccaaaggagaattgccctg 113




>42826_zma-MIR399h:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 73  tgccaaaggagaattgccctg 93




>42821_zma-MIR399c:mirbase
          Length = 207

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 168 tgccaaaggagaattgccctg 188




>42819_zma-MIR399a:mirbase
          Length = 123

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 84  tgccaaaggagaattgccctg 104




>42598_sbi-MIR399j:mirbase
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 71  tgccaaaggagaattgccctg 91




>42591_sbi-MIR399c:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 91  tgccaaaggagaattgccctg 111




>42589_sbi-MIR399a:mirbase
          Length = 136

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 97  tgccaaaggagaattgccctg 117




>42043_osa-MIR399c:mirbase
          Length = 110

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 80  tgccaaaggagaattgccctg 100




>42042_osa-MIR399b:mirbase
          Length = 97

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 67  tgccaaaggagaattgccctg 87




>42041_osa-MIR399a:mirbase
          Length = 149

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 119 tgccaaaggagaattgccctg 139




>41803_bdi-MIR399b:mirbase
          Length = 160

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 110 tgccaaaggagaattgccctg 130




>41675_vvi-MIR399h:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 60  tgccaaaggagaattgccctg 80



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 91  ctgccaaaggagaattgccctgttattc 118
           |||||||||||| ||||| |||||||||
Sbjct: 30  ctgccaaaggaggattgcactgttattc 3




>41453_ptc-MIR399f:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 72  tgccaaaggagaattgccctg 92




>41250_csi-MIR399e:mirbase
          Length = 154

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 18  tgccaaaggagaattgccctg 38




>41248_csi-MIR399c:mirbase
          Length = 149

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 109 tgccaaaggagaattgccctg 129




>41152_tcc-MIR399g:mirbase
          Length = 112

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 72  tgccaaaggagaattgccctg 92




>40092_ath-MIR399a:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 91  ctgccaaaggagaattgccctgttattc 118
           ||||||||||||| ||||||||| ||||
Sbjct: 92  ctgccaaaggagatttgccctgtaattc 119




>39889_aly-MIR399f:mirbase
          Length = 167

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 91  ctgccaaaggagaattgccctgttattc 118
           ||||||||||||| ||||||||| ||||
Sbjct: 111 ctgccaaaggagatttgccctgtaattc 138