miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41463_ptc-MIR408:mirbase
          Length = 105

 Score =  123 bits (62), Expect = 4e-29
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                       
Query: 31  aagactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctcc 90
           ||||| |||||||||||||||||||||||||||| |||  ||| ||  ||||||||||| 
Sbjct: 12  aagacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctct 71

                                             
Query: 91  acccatgcactgcctcttccctggcttgtggctc 124
           ||||||||||||||||||||||||||||||||||
Sbjct: 72  acccatgcactgcctcttccctggcttgtggctc 105




>40391_rco-MIR408:mirbase
          Length = 92

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 80/89 (89%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  aaagactgggaacaggcagagcatggatggagctattaatggaaat-atctgttttggct 88
           ||||||||||||||||||| |||||||||| |||| |||  ||||  |||||||||||||
Sbjct: 1   aaagactgggaacaggcagtgcatggatggggctactaacagaaaacatctgttttggct 60

                                        
Query: 89  ccacccatgcactgcctcttccctggctt 117
           | |||| ||||||||||||||||||||||
Sbjct: 61  ctacccctgcactgcctcttccctggctt 89




>41252_csi-MIR408:mirbase
          Length = 153

 Score = 85.7 bits (43), Expect = 8e-18
 Identities = 77/87 (88%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  aaagactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctc 89
           |||||| |||||||||||||||||||||||| | |||||  |   | |||||||||||||
Sbjct: 56  aaagacggggaacaggcagagcatggatggaaccattaacaggt-tctctgttttggctc 114

                                      
Query: 90  cacccatgcactgcctcttccctggct 116
           | |||||||||||||||||||||||||
Sbjct: 115 ctcccatgcactgcctcttccctggct 141




>40108_ath-MIR408:mirbase
          Length = 218

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 77  tctgttttggctccacccatgcactgcctcttccctggct 116
           ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 102 tctgttttgtctctacccatgcactgcctcttccctggct 141




>39897_aly-MIR408:mirbase
          Length = 211

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 77  tctgttttggctccacccatgcactgcctcttccctggct 116
           ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 99  tctgttttgtctctacccatgcactgcctcttccctggct 138




>41683_vvi-MIR408:mirbase
          Length = 107

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 78  ctgttttggctccacccatgcactgcctcttccctggct 116
           ||||||| |||| ||||||||||||||||||||||||||
Sbjct: 60  ctgtttttgctctacccatgcactgcctcttccctggct 98




>42474_ssp-MIR408d:mirbase
          Length = 180

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 88  tccacccatgcactgcctcttccctggct 116
           ||||||| |||||||||||||||||||||
Sbjct: 151 tccacccctgcactgcctcttccctggct 179




>42465_sof-MIR408d:mirbase
          Length = 215

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 88  tccacccatgcactgcctcttccctggct 116
           ||||||| |||||||||||||||||||||
Sbjct: 169 tccacccctgcactgcctcttccctggct 197




>40405_ahy-MIR408:mirbase
          Length = 122

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                   
Query: 26 tgacaaaga-ctgggaacaggcagagcatggatggagctat 65
          ||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 11 tgacaaagaactgggaacaggcagagcatgaatggaactat 51



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 94  catgcactgcctcttccctggct 116
           |||||||||||||||||||||||
Sbjct: 80  catgcactgcctcttccctggct 102




>40404_ahy-MIR408:mirbase
          Length = 122

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                   
Query: 26 tgacaaaga-ctgggaacaggcagagcatggatggagctat 65
          ||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 11 tgacaaagaactgggaacaggcagagcatgaatggaactat 51



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 94  catgcactgcctcttccctggct 116
           |||||||||||||||||||||||
Sbjct: 80  catgcactgcctcttccctggct 102




>41193_aqc-MIR408:mirbase
          Length = 87

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 93  ccatgcactgcctcttccctggct 116
           ||||||||||||||||||||||||
Sbjct: 24  ccatgcactgcctcttccctggct 1




>39490_ppt-MIR408b:mirbase
          Length = 144

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 94  catgcactgcctcttccctggctt 117
           ||||||||||||||||||||||||
Sbjct: 92  catgcactgcctcttccctggctt 115




>39742_smo-MIR408:mirbase
          Length = 109

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 95  atgcactgcctcttccctggct 116
           ||||||||||||||||||||||
Sbjct: 76  atgcactgcctcttccctggct 97




>39428_pta-MIR408:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 95  atgcactgcctcttccctggct 116
           ||||||||||||||||||||||
Sbjct: 64  atgcactgcctcttccctggct 85




>42830_zma-MIR408b:mirbase
          Length = 147

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146




>42829_zma-MIR408:mirbase
          Length = 191

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173




>42647_tae-MIR408:mirbase
          Length = 187

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157




>42600_sbi-MIR408:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205




>42473_ssp-MIR408a:mirbase
          Length = 248

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247




>42464_sof-MIR408c:mirbase
          Length = 286

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268




>42463_sof-MIR408b:mirbase
          Length = 286

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268




>42462_sof-MIR408a:mirbase
          Length = 283

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265




>42052_osa-MIR408:mirbase
          Length = 213

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  tgcactgcctcttccctggct 116
           |||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174