miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 123 bits (62), Expect = 5e-29
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 59 aagactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctcc 118
||||| |||||||||||||||||||||||||||| ||| ||| || |||||||||||
Sbjct: 12 aagacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctct 71
Query: 119 acccatgcactgcctcttccctggcttgtggctc 152
||||||||||||||||||||||||||||||||||
Sbjct: 72 acccatgcactgcctcttccctggcttgtggctc 105
>40391_rco-MIR408:mirbase
Length = 92
Score = 97.6 bits (49), Expect = 3e-21
Identities = 80/89 (89%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 58 aaagactgggaacaggcagagcatggatggagctattaatggaaat-atctgttttggct 116
||||||||||||||||||| |||||||||| |||| ||| |||| |||||||||||||
Sbjct: 1 aaagactgggaacaggcagtgcatggatggggctactaacagaaaacatctgttttggct 60
Query: 117 ccacccatgcactgcctcttccctggctt 145
| |||| ||||||||||||||||||||||
Sbjct: 61 ctacccctgcactgcctcttccctggctt 89
>41252_csi-MIR408:mirbase
Length = 153
Score = 85.7 bits (43), Expect = 1e-17
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 58 aaagactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctc 117
|||||| |||||||||||||||||||||||| | ||||| | | |||||||||||||
Sbjct: 56 aaagacggggaacaggcagagcatggatggaaccattaacaggt-tctctgttttggctc 114
Query: 118 cacccatgcactgcctcttccctggct 144
| |||||||||||||||||||||||||
Sbjct: 115 ctcccatgcactgcctcttccctggct 141
>40108_ath-MIR408:mirbase
Length = 218
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 105 tctgttttggctccacccatgcactgcctcttccctggct 144
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 102 tctgttttgtctctacccatgcactgcctcttccctggct 141
>39897_aly-MIR408:mirbase
Length = 211
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 105 tctgttttggctccacccatgcactgcctcttccctggct 144
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 99 tctgttttgtctctacccatgcactgcctcttccctggct 138
>41683_vvi-MIR408:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 106 ctgttttggctccacccatgcactgcctcttccctggct 144
||||||| |||| ||||||||||||||||||||||||||
Sbjct: 60 ctgtttttgctctacccatgcactgcctcttccctggct 98
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 116 tccacccatgcactgcctcttccctggct 144
||||||| |||||||||||||||||||||
Sbjct: 151 tccacccctgcactgcctcttccctggct 179
>42465_sof-MIR408d:mirbase
Length = 215
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 116 tccacccatgcactgcctcttccctggct 144
||||||| |||||||||||||||||||||
Sbjct: 169 tccacccctgcactgcctcttccctggct 197
>40405_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 7e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 54 tgacaaaga-ctgggaacaggcagagcatggatggagctat 93
||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 11 tgacaaagaactgggaacaggcagagcatgaatggaactat 51
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 122 catgcactgcctcttccctggct 144
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
>40404_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 7e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 54 tgacaaaga-ctgggaacaggcagagcatggatggagctat 93
||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 11 tgacaaagaactgggaacaggcagagcatgaatggaactat 51
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 122 catgcactgcctcttccctggct 144
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
>41193_aqc-MIR408:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 121 ccatgcactgcctcttccctggct 144
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 122 catgcactgcctcttccctggctt 145
||||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggctt 115
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 atgcactgcctcttccctggct 144
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 atgcactgcctcttccctggct 144
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>42647_tae-MIR408:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 tgcactgcctcttccctggct 144
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
