miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 95.6 bits (48), Expect = 8e-21
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 21 aagactgggaacaggcagagcatgggtggaactattaacacaagtatctgttttagcacc 80
||||| ||||||||||||||||||| |||| ||| ||||| ||||| |||||| || |
Sbjct: 12 aagacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctct 71
Query: 81 acccatgcactgcctcttccctggcttg 108
||||||||||||||||||||||||||||
Sbjct: 72 acccatgcactgcctcttccctggcttg 99
>41252_csi-MIR408:mirbase
Length = 153
Score = 77.8 bits (39), Expect = 2e-15
Identities = 76/87 (87%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 20 aaagactgggaacaggcagagcatgggtggaactattaacacaagtatctgttttagcac 79
|||||| ||||||||||||||||||| |||||| ||||||| | |||||||| || |
Sbjct: 56 aaagacggggaacaggcagagcatggatggaaccattaaca-ggttctctgttttggctc 114
Query: 80 cacccatgcactgcctcttccctggct 106
| |||||||||||||||||||||||||
Sbjct: 115 ctcccatgcactgcctcttccctggct 141
>40391_rco-MIR408:mirbase
Length = 92
Score = 65.9 bits (33), Expect = 7e-12
Identities = 76/89 (85%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 20 aaagactgggaacaggcagagcatgggtggaactattaacacaagt-atctgttttagca 78
||||||||||||||||||| |||||| ||| ||| ||||| || ||||||||| ||
Sbjct: 1 aaagactgggaacaggcagtgcatggatggggctactaacagaaaacatctgttttggct 60
Query: 79 ccacccatgcactgcctcttccctggctt 107
| |||| ||||||||||||||||||||||
Sbjct: 61 ctacccctgcactgcctcttccctggctt 89
>41683_vvi-MIR408:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 68 ctgttttagcaccacccatgcactgcctcttccctggct 106
||||||| || | ||||||||||||||||||||||||||
Sbjct: 60 ctgtttttgctctacccatgcactgcctcttccctggct 98
>40108_ath-MIR408:mirbase
Length = 218
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 acccatgcactgcctcttccctggct 106
||||||||||||||||||||||||||
Sbjct: 116 acccatgcactgcctcttccctggct 141
>39897_aly-MIR408:mirbase
Length = 211
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 acccatgcactgcctcttccctggct 106
||||||||||||||||||||||||||
Sbjct: 113 acccatgcactgcctcttccctggct 138
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ccacccatgcactgcctcttccctggct 106
|||||| |||||||||||||||||||||
Sbjct: 152 ccacccctgcactgcctcttccctggct 179
>42465_sof-MIR408d:mirbase
Length = 215
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 ccacccatgcactgcctcttccctggct 106
|||||| |||||||||||||||||||||
Sbjct: 170 ccacccctgcactgcctcttccctggct 197
>41193_aqc-MIR408:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 83 ccatgcactgcctcttccctggct 106
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>40405_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 24 actgggaacaggcagagcatgggtggaactat 55
||||||||||||||||||||| |||||||||
Sbjct: 20 actgggaacaggcagagcatgaatggaactat 51
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 catgcactgcctcttccctggct 106
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
>40404_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 24 actgggaacaggcagagcatgggtggaactat 55
||||||||||||||||||||| |||||||||
Sbjct: 20 actgggaacaggcagagcatgaatggaactat 51
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 catgcactgcctcttccctggct 106
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 catgcactgcctcttccctggctt 107
||||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggctt 115
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 atgcactgcctcttccctggct 106
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 atgcactgcctcttccctggct 106
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>42647_tae-MIR408:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgcactgcctcttccctggct 106
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
