miRNEST 2.0, an integrative microRNA resource :: BLAST
>40405_ahy-MIR408:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 142 ctcatgcactgcctcttccctggttctctct 172
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Sbjct: 78 ctcatgcactgcctcttccctggctctctct 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 actgggatcaggcagagcatgactggagctacctatatacaca-tttgttcattga 63
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Sbjct: 20 actgggaacaggcagagcatgaatggaactatcaatagacacattttgttcattga 75
>40404_ahy-MIR408:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 142 ctcatgcactgcctcttccctggttctctct 172
||||||||||||||||||||||| |||||||
Sbjct: 78 ctcatgcactgcctcttccctggctctctct 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 9 actgggatcaggcagagcatgactggagctacctatatacaca-tttgttcattga 63
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Sbjct: 20 actgggaacaggcagagcatgaatggaactatcaatagacacattttgttcattga 75
>41252_csi-MIR408:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 144 catgcactgcctcttccctggttctct 170
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Sbjct: 119 catgcactgcctcttccctggctctct 145
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 ctcatgcactgcctcttccctgg 164
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Sbjct: 90 ctcatgcactgcctcttccctgg 112
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 139 attctcatgcactgcctcttccctgg 164
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Sbjct: 58 attcttatgcactgcctcttccctgg 83
>41683_vvi-MIR408:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 catgcactgcctcttccctgg 164
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Sbjct: 76 catgcactgcctcttccctgg 96
>41463_ptc-MIR408:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 catgcactgcctcttccctgg 164
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Sbjct: 75 catgcactgcctcttccctgg 95
>41193_aqc-MIR408:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 144 catgcactgcctcttccctgg 164
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Sbjct: 23 catgcactgcctcttccctgg 3
>40108_ath-MIR408:mirbase
Length = 218
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 catgcactgcctcttccctgg 164
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Sbjct: 119 catgcactgcctcttccctgg 139
>39897_aly-MIR408:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 catgcactgcctcttccctgg 164
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Sbjct: 116 catgcactgcctcttccctgg 136
>39742_smo-MIR408:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 atgcactgcctcttccctgg 164
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Sbjct: 76 atgcactgcctcttccctgg 95
