miRNEST 2.0, an integrative microRNA resource :: BLAST
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 95.6 bits (48), Expect = 1e-20
Identities = 157/186 (84%), Gaps = 13/186 (6%)
Strand = Plus / Plus
Query: 21 agagagcttccttca-cccactcatgga--ggagaactggggttgaattagctgccgcct 77
||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 11 agagagcttccttcagcccactcatggataggagaaa-ggggttgaattagctgccgact 69
Query: 78 cattcatccaaccactcagtagaaa----ggaataggttttgt---gctactgtgattga 130
||||||| ||| ||| ||||||||| ||||| | | || | |||||||||||||
Sbjct: 70 cattcattcaagcac-cagtagaaaaaggggaatggatattcttttgctactgtgattgt 128
Query: 131 gtgaatgatgcgggagatagttttctat-tcctctctttccttgcttggactgaagggag 189
||||||||||||||||||| |||| || ||||| |||| ||||||||||||||||||
Sbjct: 129 gtgaatgatgcgggagataattttacatcccctctttttctgtgcttggactgaagggag 188
Query: 190 ctcctt 195
||||||
Sbjct: 189 ctcctt 194
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 85.7 bits (43), Expect = 1e-17
Identities = 74/82 (90%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 116 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctc--tttccttg 173
|||||||||||||| ||||||||||||||||||| ||||| | ||||||| |||| ||
Sbjct: 116 tgctactgtgattgtgtgaatgatgcgggagataattttcca-tcctctccttttctgtg 174
Query: 174 cttggactgaagggagctcctt 195
||||||||||||||||||||||
Sbjct: 175 cttggactgaagggagctcctt 196
>40703_mtr-MIR319:mirbase
Length = 207
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 ttgcttggactgaagggagctccttttttccattt 205
||||||||||||||||||||||| |||||| ||||
Sbjct: 165 ttgcttggactgaagggagctccctttttctattt 199
>40369_rco-MIR319c:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 4e-08
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 116 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 174
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
Query: 175 ttggactgaagggagctcc 193
|||||||||||||||||||
Sbjct: 163 ttggactgaagggagctcc 181
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 ttgaattagctgccgcctcattcatccaa 88
||||||||||||||| |||||||||||||
Sbjct: 49 ttgaattagctgccgactcattcatccaa 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcc 193
||||||||||||||||||||||
Sbjct: 148 tgcttggactgaagggagctcc 169
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 173 gcttggactgaagggagctccttttttc 200
||||||||||||||||||||||| ||||
Sbjct: 408 gcttggactgaagggagctccttctttc 435
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 1e-05
Identities = 147/182 (80%), Gaps = 6/182 (3%)
Strand = Plus / Plus
Query: 14 tggtctaagagagcttccttcac-ccactcatggaggagaactggggttgaattagctgc 72
|||| ||||||||||||||||| ||||||||||| | | ||| ||| |||||||||
Sbjct: 3 tggtttaagagagcttccttcagtccactcatggatgggttaggggtttggattagctgc 62
Query: 73 cgcctcattcatccaaccactcagtagaaaggaataggttttgtgctactgtgattgagt 132
|| ||||||||| ||| ||| ||||||| |||| || || | ||||||||| || ||
Sbjct: 63 cgactcattcattcaaacac--agtagaatggaaatggagtt-tactactgtgaatgtgt 119
Query: 133 gaatgatgcgggagatagttttctattcctctctttcct-tgcttggactgaagggagct 191
|||||||||||||| || |||| || | | |||| || ||||||||||||||||||||
Sbjct: 120 gaatgatgcgggaggtaaatttc-atccttttcttgtctgtgcttggactgaagggagct 178
Query: 192 cc 193
||
Sbjct: 179 cc 180
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 1e-05
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 116 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 174
||||| ||||| || ||||||||||||||||||| |||| || | | |||| || |||
Sbjct: 109 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atccttttcttctctgtgc 167
Query: 175 ttggactgaagggagctcc 193
|||||||||||||||||||
Sbjct: 168 ttggactgaagggagctcc 186
>40465_gma-MIR319b:mirbase
Length = 208
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccttttttc 200
|||||||||||||||||||| ||||||
Sbjct: 169 cttggactgaagggagctccctttttc 195
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 aattagctgccgcctcattcatccaa 88
|||||||||||| |||||||||||||
Sbjct: 63 aattagctgccgactcattcatccaa 88
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 128 tgagtgaatgatgcgggaga 147
||||||||||||||||||||
Sbjct: 124 tgagtgaatgatgcgggaga 143
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcc 193
||||||||||||||||||||||
Sbjct: 181 tgcttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcc 193
||||||||||||||||||||||
Sbjct: 223 tgcttggactgaagggagctcc 244
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcc 193
||||||||||||||||||||||
Sbjct: 162 tgcttggactgaagggagctcc 183
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 aattagctgccgcctcattcatccaa 88
|||||||||||| |||||||||||||
Sbjct: 52 aattagctgccgactcattcatccaa 77
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 128 tgagtgaatgatgcgggaga 147
||||||||||||||||||||
Sbjct: 114 tgagtgaatgatgcgggaga 133
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctcc 178
>41282_ctr-MIR319:mirbase
Length = 186
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcc 193
||||||||||||||||||||||
Sbjct: 154 tgcttggactgaagggagctcc 175
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 128 tgagtgaatgatgcgggaga 147
||||||||||||||||||||
Sbjct: 111 tgagtgaatgatgcgggaga 130
>40464_gma-MIR319a:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 aattagctgccgcctcattcatccaa 88
|||||||||||| |||||||||||||
Sbjct: 62 aattagctgccgactcattcatccaa 87
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccttttt 198
|||||||||||||||||||| ||||
Sbjct: 168 cttggactgaagggagctccctttt 192
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 128 tgagtgaatgatgcgggaga 147
||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggaga 142
>40370_rco-MIR319d:mirbase
Length = 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccttttttc 200
||||||||||||||||||||| ||||
Sbjct: 162 ttggactgaagggagctccttctttc 187
>40367_rco-MIR319a:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 aattagctgccgcctcattcatccaa 88
|||||||||||| |||||||||||||
Sbjct: 46 aattagctgccgactcattcatccaa 71
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 128 tgagtgaatgatgcgggaga 147
||||||||||||||||||||
Sbjct: 140 tgagtgaatgatgcgggaga 159
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>40070_ath-MIR319b:mirbase
Length = 172
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcc 193
||||||||||||||||||||||
Sbjct: 149 tgcttggactgaagggagctcc 170
>39859_aly-MIR319b:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcc 193
||||||||||||||||||||||
Sbjct: 188 tgcttggactgaagggagctcc 209
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccttttt 198
|||||||||||||||||||| ||||
Sbjct: 155 cttggactgaagggagctccctttt 179
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 128 tgagtgaatgatgcgggaga 147
||||||||||||||||||||
Sbjct: 110 tgagtgaatgatgcgggaga 129
>40071_ath-MIR319c:mirbase
Length = 199
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcctt 195
|||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctcctt 190
>39861_aly-MIR319d:mirbase
Length = 267
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcctt 195
|||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcctt 224
>39860_aly-MIR319c:mirbase
Length = 271
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcctt 195
|||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcctt 224
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcct 194
|||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcct 160
>41637_vvi-MIR319e:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcct 194
||||||||||||||||||||
Sbjct: 77 ttggactgaagggagctcct 96
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 7e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 57 gggttgaattagctgccgcctcattcatccaa 88
||||| |||| ||||||| |||||||||||||
Sbjct: 33 gggttcaatttgctgccgactcattcatccaa 64
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcct 194
||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctcct 184
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcct 194
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>41236_csi-MIR319:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcct 194
||||||||||||||||||||
Sbjct: 91 ttggactgaagggagctcct 110
>41185_aqc-MIR319:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>41129_tcc-MIR319:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctcct 194
||||||||||||||||||||
Sbjct: 94 ttggactgaagggagctcct 113
>40466_gma-MIR319c:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 172 tgcttggactgaagggagctcctt 195
||||||||||||| ||||||||||
Sbjct: 180 tgcttggactgaaaggagctcctt 203
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
