miRNEST 2.0, an integrative microRNA resource :: BLAST
>40663_mtr-MIR162:mirbase
Length = 124
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 75 aacaggaatcggtcgataaacctctgcatccagcgct 111
|||| ||||||||||||||||||||||||||||||||
Sbjct: 75 aacatgaatcggtcgataaacctctgcatccagcgct 111
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
||||||| |||||||||||||||||||||||
Sbjct: 19 cactggatgcagcggttcatcgatctgttcc 49
>41530_sly-MIR162:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 72 agcaacaggaatcggtcgataaacctctgcatccag 107
||||| ||||||||||||||||||||||||||||||
Sbjct: 64 agcaaaaggaatcggtcgataaacctctgcatccag 99
>41090_tcc-MIR162:mirbase
Length = 131
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 9 ggttaaggacactggaggcagcggttcatcgatctgttcc 48
|||||| |||||||||||||||||||||||||||| ||||
Sbjct: 10 ggttaaagacactggaggcagcggttcatcgatctcttcc 49
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccag 107
|||||||||||||||||||||
Sbjct: 91 tcgataaacctctgcatccag 111
>41578_vvi-MIR162:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcg 109
||||||||||||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcg 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
||||||| |||||||||||||||||| ||||
Sbjct: 7 cactggatgcagcggttcatcgatctcttcc 37
>39813_aly-MIR162b:mirbase
Length = 184
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgctta 113
|||||| |||||||||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccagcgctta 139
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatc 42
|||||||||||||||||||||||
Sbjct: 50 ctggaggcagcggttcatcgatc 72
>42708_zma-MIR162:mirbase
Length = 130
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 79 ggaatcggtcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatccag 130
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 7 gacactggaggcagcggttcatcgatcttttcc 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 65 caacacgaaccgatcgataaacctctgcatccagtgctt 103
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 7 gacactggaggcagcggttcatcgatcttttcc 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 65 caacacgaaccgatcgataaacctctgcatccagtgctt 103
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 7 gacactggaggcagcggttcatcgatctcttcc 39
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcgctt 112
||||||||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccagcgctt 103
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 20 gacactggaggcagcggttcatcgatctcttcc 52
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgc 110
|||||| ||||||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatccagcgc 117
>40342_rco-MIR162:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgctt 112
|||||| ||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccagcgctt 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||| ||||
Sbjct: 2 cactggaggcagcggttcatcgatctcttcc 32
>41220_csi-MIR162:mirbase
Length = 201
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgct 111
|||||| |||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccagcgct 185
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatc 42
|||||||||||||||||||||||||
Sbjct: 87 cactggaggcagcggttcatcgatc 111
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgct 111
|||||| |||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccagcgct 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
||||||| |||||||||||||||||| ||||
Sbjct: 8 cactggatgcagcggttcatcgatctcttcc 38
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgct 111
|||||| |||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatc 42
|||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||| ||||
Sbjct: 11 cactggaggcagcggttcatcgatctcttcc 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 75 aacaggaatcggtcgataaacctctgcatccagcg 109
|||| |||||| |||||||||||||||||||||||
Sbjct: 68 aacatgaatcgatcgataaacctctgcatccagcg 102
>42502_sbi-MIR162:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 ggaatcggtcgataaacctctgcatccag 107
||||||| |||||||||||||||||||||
Sbjct: 99 ggaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 ggaatcggtcgataaacctctgcatccag 107
||||||| |||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatccag 163
>40024_ath-MIR162a:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||| ||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcc 53
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcg 109
|||||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatccagcg 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||| ||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcc 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcg 109
|||||||||||||||||||||||
Sbjct: 136 tcgataaacctctgcatccagcg 158
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 77 caggaatcggtcgataaacctctgcatccag 107
||||||||| ||||||| |||||||||||||
Sbjct: 94 caggaatcgatcgataagcctctgcatccag 124
>41736_bdi-MIR162:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 79 ggaatcggtcgataaacctctgcatcc 105
||||||| |||||||||||||||||||
Sbjct: 103 ggaatcgatcgataaacctctgcatcc 129
