miRNEST 2.0, an integrative microRNA resource :: BLAST
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 76 gggtggcgtgcgaggagccaagcatacc 103
||||||||||||||||||||||||||||
Sbjct: 71 gggtggcgtgcgaggagccaagcatacc 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 ttgtgcctggctccctgcatgccacacg 36
||||||||||||||||| ||||||||||
Sbjct: 8 ttgtgcctggctccctgtatgccacacg 35
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 ggtggcgtgcgaggagccaagcatac 102
||||||||||||||||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcatac 98
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 ggtggcgtgcgaggagccaagcatac 102
||||||||||||||||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagcatac 97
>40340_rco-MIR160b:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 ggtggcgtgcgaggagccaagcatac 102
||||||||||||||||||||||||||
Sbjct: 67 ggtggcgtgcgaggagccaagcatac 92
>42707_zma-MIR160g:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcat 100
||||||||||||| |||||||||||||
Sbjct: 58 gtgggtggcgtgcaaggagccaagcat 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 2 tgcctggctccctgtatgccacac 25
>42702_zma-MIR160b:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcat 100
||||||||||||| |||||||||||||
Sbjct: 76 gtgggtggcgtgcaaggagccaagcat 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccacac 35
|||||||||||||||| |||||||||
Sbjct: 19 tgtgcctggctccctgtatgccacac 44
>41924_osa-MIR160b:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcat 100
||||||||||||| |||||||||||||
Sbjct: 86 gtgggtggcgtgcaaggagccaagcat 112
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcat 100
||||||||||||| |||||||||||||
Sbjct: 89 gtgggtggcgtgcaaggagccaagcat 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccacac 35
|||||||||||||||| |||||||||
Sbjct: 29 tgtgcctggctccctgtatgccacac 54
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcat 100
||||||||||||| |||||||||||||
Sbjct: 87 gtgggtggcgtgcaaggagccaagcat 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gtgcctggctccctgcatgccacac 35
||||||||||||||| |||||||||
Sbjct: 30 gtgcctggctccctgtatgccacac 54
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgcca 32
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgcatgcca 31
>42636_tae-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagcat 100
||||||||||||||||||||||
Sbjct: 91 tggcgtgcgaggagccaagcat 112
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagca 99
||||||||||||| ||||||||||||
Sbjct: 57 gtgggtggcgtgcaaggagccaagca 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>41926_osa-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagcat 100
||||||||||||||||||||||
Sbjct: 117 tggcgtgcgaggagccaagcat 138
>41923_osa-MIR160a:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccacac 35
|||||||||||||||| |||||||||
Sbjct: 2 tgtgcctggctccctgtatgccacac 27
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tgggtggcgtgcgaggagccaagcat 100
|||||||||||| |||||||||||||
Sbjct: 61 tgggtggcgtgcaaggagccaagcat 86
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagcat 100
||||||||||||||||||||||
Sbjct: 122 tggcgtgcgaggagccaagcat 143
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gtgcctggctccctgcatgccacac 35
||||||||||||||| |||||||||
Sbjct: 9 gtgcctggctccctgtatgccacac 33
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagca 99
|||||||||||||||||||||
Sbjct: 80 tggcgtgcgaggagccaagca 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacacgctt 39
|||||||||||||| ||||||| |||||
Sbjct: 1 tgcctggctccctgtatgccactcgctt 28
>39457_ppt-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgcatgccac 33
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgccac 32
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccaca 34
|||||||||||||||| ||||||||
Sbjct: 12 tgtgcctggctccctgtatgccaca 36
>42703_zma-MIR160c:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccac 33
|||||||||||||||| |||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>42677_ttu-MIR160:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccac 33
|||||||||||||||| |||||||
Sbjct: 7 tgtgcctggctccctgtatgccac 30
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>41925_osa-MIR160c:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccac 33
|||||||||||||||| |||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>41869_far-MIR160:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 53 tgcctggctccctgtatgccacac 76
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccac 33
|||||||||||||||| |||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcata 101
|||| ||||||||||||||||| |||||
Sbjct: 55 gtggatggcgtgcgaggagccatgcata 82
>40020_ath-MIR160b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 gtgcctggctccctgcatgccaca 34
||||||||||||||| ||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>39808_aly-MIR160b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 gtgcctggctccctgcatgccaca 34
||||||||||||||| ||||||||
Sbjct: 20 gtgcctggctccctgtatgccaca 43
