miRNEST 2.0, an integrative microRNA resource :: BLAST
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 tggagtattccaaagggatcgcattgatc 31
|||||| ||||||||||||||||||||||
Sbjct: 3 tggagtgttccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 tggagtattccaaagggatcgcattgatc 31
|||||| ||||||||||||||||||||||
Sbjct: 3 tggagtgttccaaagggatcgcattgatc 31
>42786_zma-MIR393a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 ggtggagtattccaaagggatcgcattgatc 31
||||||| | |||||||||||||||||||||
Sbjct: 11 ggtggaggactccaaagggatcgcattgatc 41
>41997_osa-MIR393:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcct 33
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 36 tccaaagggatcgcattgatcct 58
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ttccaaagggatcgcattgatcc 32
|||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatcc 32
>41238_csi-MIR393:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcct 43
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcct 43
>40706_mtr-MIR393:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcct 43
>40295_bna-MIR393:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcct 23
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ggatcatgcgatctcttcgga 76
|||||||||||||||||||||
Sbjct: 107 ggatcatgcgatctcttcgga 127
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcct 33
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 56 ggatcatgcgatctcttcggatt 78
||||||||||||||||| |||||
Sbjct: 130 ggatcatgcgatctctttggatt 152
>40075_ath-MIR393a:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcct 33
>39866_aly-MIR393b:mirbase
Length = 169
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatcct 40
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 56 ggatcatgcgatctcttcggatt 78
||||||||||||||||| |||||
Sbjct: 132 ggatcatgcgatctctttggatt 154
>39865_aly-MIR393a:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcct 33
|||||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatcct 40
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>42566_sbi-MIR393:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 20 tccaaagggatcgcattgatcc 41
>41999_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 gtggagtattccaaagggatcgcattgatc 31
|||||| | |||||||||||||||||||||
Sbjct: 18 gtggaggactccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 gtggagtattccaaagggatcgcattgatc 31
|||||| | |||||||||||||||||||||
Sbjct: 18 gtggaggactccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 gtggagtattccaaagggatcgcattgatc 31
|||||| | |||||||||||||||||||||
Sbjct: 33 gtggaggactccaaagggatcgcattgatc 62
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatcc 27
>40470_gma-MIR393:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatcc 32
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>40373_rco-MIR393:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttccaaagggatcgcattgatc 31
||||||||||||||||||||||
Sbjct: 5 ttccaaagggatcgcattgatc 26
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tccaaagggatcgcattgatc 31
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
