miRNEST 2.0, an integrative microRNA resource :: BLAST
>41547_sly-MIR397:mirbase
Length = 116
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 16 cagagtgcttagaaatatcattgagtgcagcgttgatga 54
|||||| |||||||| || ||||||||||||||||||||
Sbjct: 1 cagagtacttagaaacatgattgagtgcagcgttgatga 39
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 111 tcatctacgctgcactcaatcatgtttc 138
||||| ||||||||||||||||||||||
Sbjct: 39 tcatcaacgctgcactcaatcatgtttc 12
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaaa 56
|||||||||||||||||||||||||
Sbjct: 10 atcattgagtgcagcgttgatgaaa 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 109 tttcatctacgctgcactcaatcatgttt 137
||||||| |||||||||||||| ||||||
Sbjct: 34 tttcatcaacgctgcactcaatgatgttt 6
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaaa 56
|||||||||||||||||||||||||
Sbjct: 10 atcattgagtgcagcgttgatgaaa 34
>42037_osa-MIR397a:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaa 55
||||||||||||||||||||||||
Sbjct: 10 atcattgagtgcagcgttgatgaa 33
>41798_bdi-MIR397b:mirbase
Length = 292
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaa 55
||||||||||||||||||||||||
Sbjct: 31 atcattgagtgcagcgttgatgaa 54
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaa 55
||||||||||||||||||||||||
Sbjct: 177 atcattgagtgcagcgttgatgaa 200
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaa 55
||||||||||||||||||||||||
Sbjct: 17 atcattgagtgcagcgttgatgaa 40
>41244_csi-MIR397:mirbase
Length = 156
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaa 55
||||||||||||||||||||||||
Sbjct: 17 atcattgagtgcagcgttgatgaa 40
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 110 ttcatctacgctgcactcaatcatgttt 137
|||||| |||||||||||||| ||||||
Sbjct: 40 ttcatcaacgctgcactcaatgatgttt 13
>41143_tcc-MIR397:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaa 55
||||||||||||||||||||||||
Sbjct: 20 atcattgagtgcagcgttgatgaa 43
>40380_rco-MIR397:mirbase
Length = 157
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatgaa 55
||||||||||||||||||||||||
Sbjct: 5 atcattgagtgcagcgttgatgaa 28
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 110 ttcatctacgctgcactcaatcatgttt 137
|||||| |||||||||||||| ||||||
Sbjct: 28 ttcatcaacgctgcactcaatgatgttt 1
>41443_ptc-MIR397b:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 34 cattgagtgcagcgttgatgaaa 56
|||||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatgaaa 34
>42587_sbi-MIR397:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tcattgagtgcagcgttgatga 54
||||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatga 22
>40298_bna-MIR397b:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatg 53
||||||||||||||||||||||
Sbjct: 5 atcattgagtgcagcgttgatg 26
>40297_bna-MIR397a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatg 53
||||||||||||||||||||||
Sbjct: 5 atcattgagtgcagcgttgatg 26
>40087_ath-MIR397a:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatg 53
||||||||||||||||||||||
Sbjct: 10 atcattgagtgcagcgttgatg 31
>39880_aly-MIR397b:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatg 53
||||||||||||||||||||||
Sbjct: 18 atcattgagtgcagcgttgatg 39
>39879_aly-MIR397a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttgatg 53
||||||||||||||||||||||
Sbjct: 19 atcattgagtgcagcgttgatg 40
>42038_osa-MIR397b:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 35 attgagtgcagcgttgatgaa 55
|||||||||||||||||||||
Sbjct: 13 attgagtgcagcgttgatgaa 33
>41891_hvu-MIR397:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 36 ttgagtgcagcgttgatgaa 55
||||||||||||||||||||
Sbjct: 14 ttgagtgcagcgttgatgaa 33
>39382_pab-MIR397:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 atcattgagtgcagcgttga 51
||||||||||||||||||||
Sbjct: 16 atcattgagtgcagcgttga 35
