miRNEST 2.0, an integrative microRNA resource :: BLAST
>40468_gma-MIR390a:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatgga 52
|||||||||||||||||||||||||| |||||||
Sbjct: 3 aatctgtaaagctcaggagggatagcgccatgga 36
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 92 ttgcgctatccatcctgagtttcatggtttct 123
||||||||||||||||||||||||||| ||||
Sbjct: 65 ttgcgctatccatcctgagtttcatggcttct 96
>40467_gma-MIR390a:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatgga 52
|||||||||||||||||||||||||| |||||||
Sbjct: 3 aatctgtaaagctcaggagggatagcgccatgga 36
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 92 ttgcgctatccatcctgagtttcatggtttct 123
||||||||||||||||||||||||||| ||||
Sbjct: 65 ttgcgctatccatcctgagtttcatggcttct 96
>40469_gma-MIR390b:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcacc 47
|||||||||||||||||||||||||||||
Sbjct: 3 aatctgtaaagctcaggagggatagcacc 31
>40072_ath-MIR390a:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatg 50
|||||||||||||||||||||||||| |||||
Sbjct: 10 aatctgtaaagctcaggagggatagcgccatg 41
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttcat 91
>39862_aly-MIR390a:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatg 50
|||||||||||||||||||||||||| |||||
Sbjct: 21 aatctgtaaagctcaggagggatagcgccatg 52
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 80 gcgctatccatcctgagtttcat 102
>41237_csi-MIR390:mirbase
Length = 154
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcatggtttctt 124
||||||||||||||||||||||||| |||||
Sbjct: 98 gcgctatccatcctgagtttcatggcttctt 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatgg 51
||||||| |||||||||||||||||| ||||||
Sbjct: 13 aatctgttaagctcaggagggatagcgccatgg 45
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccat 49
|||||||||||||||||||||||||| ||||
Sbjct: 13 aatctgtaaagctcaggagggatagcgccat 43
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcatggtttctt 124
|||||||| |||||||||||||||| |||||
Sbjct: 79 gcgctatctatcctgagtttcatgggttctt 109
>40705_mtr-MIR390:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 ttgcgctatccatcctgagtttcatgg 118
|||||||||||||||||||||||||||
Sbjct: 74 ttgcgctatccatcctgagtttcatgg 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 ctgtaaagctcaggagggatagcaccat 49
|||| |||||||||||||||||| ||||
Sbjct: 1 ctgttaagctcaggagggatagcgccat 28
>40293_bna-MIR390b:mirbase
Length = 105
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccat 49
|||||||||||||||||||||||||| ||||
Sbjct: 10 aatctgtaaagctcaggagggatagcgccat 40
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatgga 52
||||||| |||||||||||||||||| |||||||
Sbjct: 3 aatctgttaagctcaggagggatagcgccatgga 36
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtttcat 109
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatgga 52
||||||| |||||||||||||||||| |||||||
Sbjct: 10 aatctgttaagctcaggagggatagcgccatgga 43
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 94 gcgctatccatcctgagtttcat 116
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatgga 52
||||||| |||||||||||||||||| |||||||
Sbjct: 7 aatctgttaagctcaggagggatagcgccatgga 40
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 91 gcgctatccatcctgagtttcat 113
>40294_bna-MIR390c:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 ctgtaaagctcaggagggatagcaccatg 50
||||||||||||||||||||||| |||||
Sbjct: 18 ctgtaaagctcaggagggatagcgccatg 46
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcatggtttctt 124
||||||||||||||||||| ||||| |||||
Sbjct: 85 gcgctatccatcctgagttccatggcttctt 115
>40292_bna-MIR390a:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 ctgtaaagctcaggagggatagcaccatg 50
||||||||||||||||||||||| |||||
Sbjct: 28 ctgtaaagctcaggagggatagcgccatg 56
>41640_vvi-MIR390:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatg 50
||||||| |||||||||||||||||| |||||
Sbjct: 3 aatctgttaagctcaggagggatagcgccatg 34
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagcaccatg 50
||||||| |||||||||||||||||| |||||
Sbjct: 3 aatctgttaagctcaggagggatagcgccatg 34
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 20 atctgtaaagctcaggagggatagcaccatg 50
|||||| |||||||||||||||||| |||||
Sbjct: 4 atctgttaagctcaggagggatagcgccatg 34
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagtttcat 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagc 44
||||||| ||||||||||||||||||
Sbjct: 3 aatctgttaagctcaggagggatagc 28
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 88 gcgctatccatcctgagtttcat 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 ctgtaaagctcaggagggatagcaccat 49
|||| |||||||||||||||||| ||||
Sbjct: 16 ctgttaagctcaggagggatagcgccat 43
>40372_rco-MIR390b:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttcat 116
|||||||||||||||||||||||
Sbjct: 96 gcgctatccatcctgagtttcat 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcaccatgga 52
|||||||||||||||||| |||||||
Sbjct: 6 aagctcaggagggatagcgccatgga 31
>40073_ath-MIR390b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 taaagctcaggagggatagcaccatgg 51
|||||||||||||||||||| ||||||
Sbjct: 13 taaagctcaggagggatagcgccatgg 39
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 aatctgtaaagctcaggagggatagc 44
||||||| ||||||||||||||||||
Sbjct: 3 aatctgttaagctcaggagggatagc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagttt 113
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>40371_rco-MIR390a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 gcgctatccatcctgagtttca 115
||||||||||||||||||||||
Sbjct: 82 gcgctatccatcctgagtttca 103
>39863_aly-MIR390b:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 taaagctcaggagggatagcaccatg 50
|||||||||||||||||||| |||||
Sbjct: 17 taaagctcaggagggatagcgccatg 42
