miRNEST 2.0, an integrative microRNA resource :: BLAST
>41528_sly-MIR159:mirbase
Length = 177
Score = 119 bits (60), Expect = 9e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaacagaggatctaacaggtaagattgagctgctgacctatgg 81
|||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 82 attcctcagccctatctatt 101
||||||||||||||||||||
Sbjct: 61 attcctcagccctatctatt 80
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 113 bits (57), Expect = 5e-26
Identities = 143/169 (84%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaacagaggatctaacaggtaagattgagctgctgaccta 78
||||||||||||||||||||||| ||||| ||| | || ||||| ||||||| | |||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 79 tggattcctcagccctatctattatttgattggataggtttgtgggttgcatatgtcagg 138
||||| || ||| ||||||||| | ||| ||||||||||| || |||||||| |||||
Sbjct: 68 tggat-ccacagtcctatctatcaactgaa-ggataggtttgcggcttgcatatctcagg 125
Query: 139 agcttcattgccctaagttggatccctttttggattgaagggagctcta 187
||||| |||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 126 agctttattgcctaatgttagatccctttttggattgaagggagctcta 174
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 105 bits (53), Expect = 1e-23
Identities = 142/169 (84%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaacagaggatctaacaggtaagattgagctgctgaccta 78
||||||||||||||||||||||| ||||| ||| | || ||||| ||||||| | |||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 79 tggattcctcagccctatctattatttgattggataggtttgtgggttgcatatgtcagg 138
||||| || ||| ||||||||| | || ||||||||||| || |||||||| |||||
Sbjct: 68 tggat-ccacagtcctatctatcaaccgaa-ggataggtttgcggcttgcatatctcagg 125
Query: 139 agcttcattgccctaagttggatccctttttggattgaagggagctcta 187
||||| |||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 126 agctttattgcctaatgttagatccctttttggattgaagggagctcta 174
>40338_rco-MIR159:mirbase
Length = 180
Score = 93.7 bits (47), Expect = 5e-20
Identities = 145/178 (81%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaacagaggatctaacaggtaagattgagctgctgaccta 78
||||||||||||||||||||||| ||||||||| || ||||||||||||||| |||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 79 tggattcctcagccctatct------attatttgattggataggtttgtgggttgcatat 132
||||| || ||||||||| ||||| ||||||||| |||||| ||||||||
Sbjct: 61 tggatcccacagccctataagcagagattataattttggataggcttgtggcttgcatat 120
Query: 133 gtcaggagcttcattgccctaagttggatccctttttggattgaagggagctctacat 190
|||||||||||||| || | || ||||| | ||||||||||||||||||||||||
Sbjct: 121 ctcaggagcttcattaccttgtattagatccttgtttggattgaagggagctctacat 178
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 91.7 bits (46), Expect = 2e-19
Identities = 144/177 (81%), Gaps = 6/177 (3%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaacagaggatctaacaggtaagattgagctgctgaccta 78
||||||||||||||||||||||| ||||| ||| || || |||||||||||||||| ||
Sbjct: 6 gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 65
Query: 79 tggattcctcagccctatctattatttg------attggataggtttgtgggttgcatat 132
||||| || |||||||||| | || |||||||||| |||||| ||||||||
Sbjct: 66 tggatcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatat 125
Query: 133 gtcaggagcttcattgccctaagttggatccctttttggattgaagggagctctaca 189
||||||||| |||| || | || ||||| | |||||||||||||||||||||||
Sbjct: 126 ctcaggagctgcattatccaagtttagatccttgtttggattgaagggagctctaca 182
>41218_csi-MIR159:mirbase
Length = 216
Score = 65.9 bits (33), Expect = 1e-11
Identities = 70/80 (87%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaacagaggatctaaca--ggtaagattgagctgctgacc 76
||||||||||||||||||||||| ||||| |||| || ||||| ||||||||||||| |
Sbjct: 9 gagtggagctccttgaagtccaaaagaggttctagcaagggtaa-attgagctgctgagc 67
Query: 77 tatggattcctcagccctat 96
||||||| || ||| |||||
Sbjct: 68 tatggatcccacagtcctat 87
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 165 tttttggattgaagggagctctac 188
||||||||||||||||||||||||
Sbjct: 184 tttttggattgaagggagctctac 207
>40397_ahy-MIR159:mirbase
Length = 197
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 20 agtggagctccttgaagtccaacagagg 47
||||||||||||||||||||||||||||
Sbjct: 1 agtggagctccttgaagtccaacagagg 28
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctacat 190
||||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctacat 180
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 125 ttgcatatgtcaggagcttcattgccctaagttggatccctttttggattgaagggagct 184
|||||||| |||||||||| ||| || | ||| |||| ||||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttattacctaatgttagatctttttttggattgaagggagct 175
Query: 185 cta 187
|||
Sbjct: 176 cta 178
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaa 41
|||||||||||||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaa 30
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaacagaggatctaacaggtaagattgagctgctgacctatg 80
||||||||||||||||||||| |||||||| || || |||||||||||| | |||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 gat 83
|||
Sbjct: 61 gat 63
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctac 188
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaacagaggatctaacaggtaagattgagctgctgacctatg 80
||||||||||||||||||||| |||||||| || || |||||||||||| | |||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 gat 83
|||
Sbjct: 61 gat 63
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctac 188
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctacat 190
||||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacat 175
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 20 agtggagctccttgaagtccaacagaggatct 51
|||||||||||||||||||||| ||||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatct 50
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctaca 189
|||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctaca 197
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctacat 190
||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacat 206
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctaca 189
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctaca 189
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 ttggattgaagggagctctaca 189
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tttggattgaagggagctctac 188
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 162 ccctttttggattgaagggagctct 186
|||| ||||||||||||||||||||
Sbjct: 225 ccctctttggattgaagggagctct 249
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 162 ccctttttggattgaagggagctct 186
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 162 ccctttttggattgaagggagctct 186
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
