miRNEST 2.0, an integrative microRNA resource :: BLAST
>42683_zma-MIR156f:mirbase
Length = 167
Score = 73.8 bits (37), Expect = 3e-14
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaacagcagctgcatctaggcct 59
|||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 153 agctgacagaaagagaagtgagcacgcaacagcagctgcgcctaggcct 105
Score = 67.9 bits (34), Expect = 2e-12
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 92 agatacagtctggccgctgcatgctcactctcttctgtcagccaca 137
|||| ||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 60 agatgcagtctggccgatgcgtgctcactctcttctgtcagccaca 15
>42678_zma-MIR156a:mirbase
Length = 152
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 13 ctgacagagagagaagtgagcacgcaacagcagctgcatc 52
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 134 ctgacagagagagaagtgagcacgcagcagcagctgcatc 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 97 cagtctggccgctgcatgctcactctcttctgtcag 132
||||||| |||||| ||||||||||||||||||||
Sbjct: 52 cagtctgcccgctgtgtgctcactctcttctgtcag 17
>42493_sbi-MIR156i:mirbase
Length = 121
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 13 ctgacagagagagaagtgagcacgcaacagcagctgcatc 52
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 120 ctgacagagagagaagtgagcacgcagcagcagctgcatc 81
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 97 cagtctggccgctgcatgctcactctcttctgtcag 132
||||||| |||||| ||||||||||||||||||||
Sbjct: 37 cagtctgcccgctgtgtgctcactctcttctgtcag 2
>42490_sbi-MIR156f:mirbase
Length = 128
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaacagcagctgcatctaggcctgcatccatcca 70
|||||||||| |||||||||||||||||||||||||||| |||| | | ||||||||||
Sbjct: 127 agctgacagaaagagaagtgagcacgcaacagcagctgcgcctagacatccatccatcca 68
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 92 agatacagtctggccgctgcatgctcactctcttctgtcagc 133
|||| ||||||||||| ||| |||||||||||||||||||||
Sbjct: 42 agatgcagtctggccgatgcgtgctcactctcttctgtcagc 1
>42684_zma-MIR156g:mirbase
Length = 121
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaacagcagctgc 49
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 121 agctgacagaaagagaagtgagcacgcaacagcagctgc 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 92 agatacagtctggccgctgcatgctcactctcttctgtcagcc 134
|||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 43 agatgcagtctggccgatgcgtgctcactctcttctgtcagcc 1
>41727_bdi-MIR156b:mirbase
Length = 205
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 14 tgacagagagagaagtgagcacgcaacagcagctgcatc 52
||||||||||||||||||||||||| ||||||| |||||
Sbjct: 173 tgacagagagagaagtgagcacgcagcagcagcagcatc 135
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 92 agatacagtctggccgctgcatgctcactctcttctgtca 131
|||| |||||||||||||| |||||||||||||||||||
Sbjct: 70 agatgcagtctggccgctgtgtgctcactctcttctgtca 31
>41910_osa-MIR156g:mirbase
Length = 116
Score = 60.0 bits (30), Expect = 5e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 89 ttcagatacagtctggccgctgcatgctcactctcttctgtcagcc 134
||||||| ||||||| |||||| ||||||||||||||||||||||
Sbjct: 46 ttcagatgcagtctgcccgctgtgtgctcactctcttctgtcagcc 1
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaac 40
||||||||||||||||||||||||||||||
Sbjct: 116 agctgacagagagagaagtgagcacgcaac 87
>42633_tae-MIR156:mirbase
Length = 278
Score = 54.0 bits (27), Expect = 3e-08
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 12 gctgacagagagagaagtgagcacgcaacagcagctgcatcta 54
|||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 209 gctgacagagagagg-gtgagcacgcaacagcagctgcgtcta 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 104 gccgctgcatgctcactctcttctgtcagcca 135
||||||| |||||||||||||||||||||||
Sbjct: 123 gccgctgtgtgctcactctcttctgtcagcca 92
>42467_ssp-MIR156:mirbase
Length = 543
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 12 gctgacagagagagaagtgagcacgca 38
|||||||||||||||||||||||||||
Sbjct: 104 gctgacagagagagaagtgagcacgca 78
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcagcc 134
||||||||||||||||||||||
Sbjct: 23 tgctcactctcttctgtcagcc 2
>42451_sof-MIR156:mirbase
Length = 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 12 gctgacagagagagaagtgagcacgca 38
|||||||||||||||||||||||||||
Sbjct: 120 gctgacagagagagaagtgagcacgca 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcagcc 134
||||||||||||||||||||||
Sbjct: 39 tgctcactctcttctgtcagcc 18
>41909_osa-MIR156f:mirbase
Length = 186
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 97 cagtctggccgctgcatgctcactctcttctgtca 131
|||||||||||||| |||||||||||||||||||
Sbjct: 38 cagtctggccgctgtgtgctcactctcttctgtca 4
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaacagcagctg 48
|||||||||| ||||||||||||||||| | |||||||
Sbjct: 186 agctgacagaaagagaagtgagcacgcagcggcagctg 149
>41086_tcc-MIR156g:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaacagca 44
|||||||||| |||||||||||||||||| ||||
Sbjct: 103 agctgacagaaagagaagtgagcacgcaaaagca 70
>42487_sbi-MIR156c:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 14 tgacagagagagaagtgagcacgca 38
|||||||||||||||||||||||||
Sbjct: 95 tgacagagagagaagtgagcacgca 71
>41906_osa-MIR156c:mirbase
Length = 149
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 gctgacagagagagaagtgagcac 35
||||||||||||||||||||||||
Sbjct: 121 gctgacagagagagaagtgagcac 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcagcc 134
||||||||||||||||||||||
Sbjct: 47 tgctcactctcttctgtcagcc 26
>41904_osa-MIR156a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 14 tgacagagagagaagtgagcacgc 37
||||||||||||||||||||||||
Sbjct: 95 tgacagagagagaagtgagcacgc 72
>41881_hvu-MIR156:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 15 gacagagagagaagtgagcacgcaacagcagctgcatcta 54
||||||||||| |||||||||||||||||||||| ||||
Sbjct: 134 gacagagagagg-gtgagcacgcaacagcagctgcgtcta 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 104 gccgctgcatgctcactctcttctgtca 131
||||||| |||||||||||||||||||
Sbjct: 28 gccgctgtgtgctcactctcttctgtca 1
>40425_gma-MIR156a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgca 38
|||||||||| |||||||||||||||||
Sbjct: 106 agctgacagatagagaagtgagcacgca 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcagcc 134
||||||||||||||||||||||
Sbjct: 39 tgctcactctcttctgtcagcc 18
>42680_zma-MIR156c:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 gctgacagagagagaagtgagcacgca 38
||||||| |||||||||||||||||||
Sbjct: 121 gctgacaaagagagaagtgagcacgca 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcagc 133
|||||||||||||||||||||
Sbjct: 39 tgctcactctcttctgtcagc 19
>40331_rco-MIR156b:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 14 tgacagagagagaagtgagcacgcaacagca 44
||||||| |||||||||||||||||| ||||
Sbjct: 85 tgacagaaagagaagtgagcacgcaaaagca 55
>42681_zma-MIR156d:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 gctgacagagagagaagtgagcacgc 37
||||||||| ||||||||||||||||
Sbjct: 101 gctgacagaaagagaagtgagcacgc 76
>41562_vvi-MIR156b:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaacagca 44
|||||||||| |||||| ||||||||||| ||||
Sbjct: 93 agctgacagaaagagaaatgagcacgcaaaagca 60
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 29 tgctcactctcttctgtcag 10
>41290_ptc-MIR156c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgcaacagca 44
|||||||||| ||||||||||||||||| ||||
Sbjct: 95 agctgacagaatgagaagtgagcacgcaaaagca 62
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 29 tgctcactctcttctgtcag 10
>40656_mtr-MIR156i:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 14 tgacagagagagaagtgagcacgca 38
||||||| |||||||||||||||||
Sbjct: 87 tgacagaaagagaagtgagcacgca 63
>42682_zma-MIR156e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 tgacagagagagaagtgagcacgc 37
|||||||||||| |||||||||||
Sbjct: 106 tgacagagagagcagtgagcacgc 83
>42485_sbi-MIR156a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 tgacagagagagaagtgagcacgc 37
||||||| ||||||||||||||||
Sbjct: 84 tgacagaaagagaagtgagcacgc 61
>41915_osa-MIR156l:mirbase
Length = 156
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 gctgacagagagagaagtgagcac 35
||||||||| ||||||||||||||
Sbjct: 148 gctgacagaaagagaagtgagcac 125
>41905_osa-MIR156b:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 61 tgctcactctcttctgtcag 42
>41564_vvi-MIR156d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 29 tgctcactctcttctgtcag 10
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgca 38
|||||||||| ||||| |||||||||||
Sbjct: 94 agctgacagaaagagaggtgagcacgca 67
>41293_ptc-MIR156f:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 29 tgctcactctcttctgtcag 10
>41288_ptc-MIR156a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 29 tgctcactctcttctgtcag 10
>41277_ctr-MIR156:mirbase
Length = 190
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 53 tgctcactctcttctgtcag 34
>41217_csi-MIR156:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 31 tgctcactctcttctgtcag 12
>41082_tcc-MIR156c:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 39 tgctcactctcttctgtcag 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgca 38
|||||||||| |||||||||||||||||
Sbjct: 104 agctgacaga-agagaagtgagcacgca 78
>40333_rco-MIR156d:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 24 tgctcactctcttctgtcag 5
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 11 agctgacagagagagaagtgagcacgca 38
|||||||||| ||||| |||||||||||
Sbjct: 89 agctgacagaaagagaggtgagcacgca 62
>40004_ath-MIR156c:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 30 tgctcactctcttctgtcag 11
>40003_ath-MIR156b:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 65 tgctcactctcttctgtcag 46
>40002_ath-MIR156a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 39 tgctcactctcttctgtcag 20
>39792_aly-MIR156c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 29 tgctcactctcttctgtcag 10
>39791_aly-MIR156b:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 31 tgctcactctcttctgtcag 12
>39790_aly-MIR156a:mirbase
Length = 184
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 113 tgctcactctcttctgtcag 132
||||||||||||||||||||
Sbjct: 67 tgctcactctcttctgtcag 48
