miRNEST 2.0, an integrative microRNA resource :: BLAST
>41926_osa-MIR160d:mirbase
Length = 142
Score = 85.7 bits (43), Expect = 8e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 5 ggggatatgcctggctccctgtatgccactcgcgtagctgcca 47
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggatatgcctggctccctgtatgccactcgcgtagctgcca 43
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 100 tggctctactgcggatggcgtgcgaggagccaagcatgacc 140
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tggctctactgcggatggcgtgcgaggagccaagcatgacc 142
>42636_tae-MIR160:mirbase
Length = 148
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 6 gggatatgcctggctccctgtatgccactcgcgtagctgcca 47
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gggatatgcctggctccctgtatgccactcgcgtagctgcca 57
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 100 tggctctactgcggatggcgtgcgaggagccaagcatgacc 140
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 76 tggctctaccgcggatggcgtgcgaggagccaagcatgacc 116
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 6 gggatatgcctggctccctgtatgccactcgcgtagctgcca 47
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 gggatatgcctggctccctgtatgccactcgcgtagctgcca 67
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 100 tggctctactgcggatggcgtgcgaggagccaagcatgacc 140
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 107 tggctctaccgcggatggcgtgcgaggagccaagcatgacc 147
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 100 tggctctactgcggatggcgtgcgaggagccaagca 135
||||||||||||||||||||||||||||||||||||
Sbjct: 65 tggctctactgcggatggcgtgcgaggagccaagca 100
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactcgcgtagctgcca 47
|||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcttagctgcca 36
>42704_zma-MIR160d:mirbase
Length = 142
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 100 tggctctactgcggatggcgtgcgaggagccaagcatgacc 140
|||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 88 tggctccactgcggatggcgtgcgtggagccaagcatgacc 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 8 gatatgcctggctccctgtatgccactcgcgtagctgcca 47
|||||||||||||||||||||||||||||| | |||||||
Sbjct: 17 gatatgcctggctccctgtatgccactcgcatggctgcca 56
>41927_osa-MIR160e:mirbase
Length = 114
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 3 taggggatatgcctggctccctgtatgccactcgcgtagctgcca 47
||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 2 taggggatatgcctggctccctgtatgccgctcgcatggctgcca 46
>42705_zma-MIR160e:mirbase
Length = 94
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 aggggatatgcctggctccctgtatgccactcgc 37
|||| |||||||||||||||||||||||||||||
Sbjct: 1 agggaatatgcctggctccctgtatgccactcgc 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 108 ctgcggatggcgtgcgaggagccaagcatg 137
|||||| |||||||||||| ||||||||||
Sbjct: 59 ctgcggctggcgtgcgaggtgccaagcatg 88
>42706_zma-MIR160f:mirbase
Length = 116
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 3 taggggatatgcctggctccctgtatgccactcgc 37
||||| ||||||||||||||||||||||| |||||
Sbjct: 12 tagggaatatgcctggctccctgtatgccgctcgc 46
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactcgc 37
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcgc 26
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 108 ctgcggatggcgtgcgaggagccaagca 135
|||||| |||||||||||| ||||||||
Sbjct: 68 ctgcggctggcgtgcgaggtgccaagca 95
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gggatatgcctggctccctgtatgccactc 35
||||| ||||||||||||||||||||||||
Sbjct: 25 gggatgtgcctggctccctgtatgccactc 54
>42703_zma-MIR160c:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 ggatatgcctggctccctgtatgccactc 35
|||| ||||||||||||||||||||||||
Sbjct: 2 ggatgtgcctggctccctgtatgccactc 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccactc 32
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>41925_osa-MIR160c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccactc 30
>41924_osa-MIR160b:mirbase
Length = 139
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccactc 53
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 110 gcggatggcgtgcgaggagccaagcatg 137
|||||||||||||||||||||| |||||
Sbjct: 65 gcggatggcgtgcgaggagccatgcatg 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 109 tgcggatggcgtgcgaggagccaagcat 136
||||| ||||||||||||||||||||||
Sbjct: 68 tgcgggtggcgtgcgaggagccaagcat 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41529_sly-MIR160a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 17 atatgcctggctccctgtatgcca 40
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgccac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tggcgtgcgaggagccaagcat 136
||||||||||||||||||||||
Sbjct: 75 tggcgtgcgaggagccaagcat 96
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgccac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tggcgtgcgaggagccaagcat 136
||||||||||||||||||||||
Sbjct: 74 tggcgtgcgaggagccaagcat 95
>40340_rco-MIR160b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgccac 27
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tggcgtgcgaggagccaagcat 136
||||||||||||||||||||||
Sbjct: 69 tggcgtgcgaggagccaagcat 90
>40021_ath-MIR160c:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgccac 45
>42707_zma-MIR160g:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgccac 23
>41869_far-MIR160:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgccac 74
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 2 tatgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgcca 62
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccact 34
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>42702_zma-MIR160b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>42701_zma-MIR160a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccac 31
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41923_osa-MIR160a:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccac 25
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>40020_ath-MIR160b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39808_aly-MIR160b:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>39374_pab-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccac 35
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 112 ggatggcgtgcgaggagccaagcat 136
|||||||||||||||||||| ||||
Sbjct: 57 ggatggcgtgcgaggagccatgcat 81
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40658_mtr-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 114 atggcgtgcgaggagccaagcatg 137
|||||||||||||||||| |||||
Sbjct: 79 atggcgtgcgaggagccatgcatg 102
>40436_gma-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgtatgccac 33
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
