miRNEST 2.0, an integrative microRNA resource :: BLAST
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 149 bits (75), Expect = 6e-37
Identities = 103/113 (91%), Gaps = 7/113 (6%)
Strand = Plus / Plus
Query: 9 caagcatgaggcaggaactgcattacttgcaaggaagtcacaactcacaaaatcaattgg 68
||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcac-------aaaatcaattgc 53
Query: 69 aagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 121
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 aggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 125 bits (63), Expect = 8e-30
Identities = 101/113 (89%), Gaps = 8/113 (7%)
Strand = Plus / Plus
Query: 9 caagcatgaggcaggaactgcattacttgcaaggaagtcacaactcacaaaatcaattgg 68
||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa-------aatcaattgc 53
Query: 69 aagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 121
| || ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 54 agga-catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
>42089_osa-MIR444d:mirbase
Length = 143
Score = 109 bits (55), Expect = 5e-25
Identities = 111/128 (86%), Gaps = 10/128 (7%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaaggaagtcacaactcacaaaa 60
||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa-------aa 66
Query: 61 tcaattggaagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 120
||| || || ||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 67 tca-ttagatgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 123
Query: 121 gctgcctc 128
||||||||
Sbjct: 124 gctgcctc 131
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 79 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 126
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42088_osa-MIR444d:mirbase
Length = 143
Score = 109 bits (55), Expect = 5e-25
Identities = 111/128 (86%), Gaps = 10/128 (7%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaaggaagtcacaactcacaaaa 60
||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa-------aa 66
Query: 61 tcaattggaagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 120
||| || || ||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 67 tca-ttagatgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 123
Query: 121 gctgcctc 128
||||||||
Sbjct: 124 gctgcctc 131
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 79 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 126
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42087_osa-MIR444d:mirbase
Length = 143
Score = 109 bits (55), Expect = 5e-25
Identities = 111/128 (86%), Gaps = 10/128 (7%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaaggaagtcacaactcacaaaa 60
||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa-------aa 66
Query: 61 tcaattggaagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 120
||| || || ||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 67 tca-ttagatgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 123
Query: 121 gctgcctc 128
||||||||
Sbjct: 124 gctgcctc 131
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 79 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 126
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42649_tae-MIR444b:mirbase
Length = 162
Score = 93.7 bits (47), Expect = 3e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 74 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctc 152
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 15 ggcaccgagcatgaggcaacaactgcattacttgc 49
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 91.7 bits (46), Expect = 1e-19
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 74 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 127
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
>42091_osa-MIR444f:mirbase
Length = 154
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 85 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 152
Score = 60.0 bits (30), Expect = 4e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaaggaagtcacaactcacaa 58
||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||
Sbjct: 3 ggtggcaccaagcatgaggttacaactgcattacttgcaagggaatcacaagtcacaa 60
>42648_tae-MIR444:mirbase
Length = 426
Score = 85.7 bits (43), Expect = 7e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 74 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctc 176
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
>42084_osa-MIR444b:mirbase
Length = 138
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttg 121
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttg 121
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 126
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttg 121
||||||||||| | |||||||| |||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>42086_osa-MIR444c:mirbase
Length = 138
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126
>42085_osa-MIR444c:mirbase
Length = 138
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 86 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 69.9 bits (35), Expect = 4e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaaggaagtcacaa 51
||||||||||||||||||||| ||||||||||||| ||||||||| ||||
Sbjct: 1 ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaa 51
>42082_osa-MIR444a:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 87 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
|||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctc 122
>42081_osa-MIR444a:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 87 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 128
|||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctc 122
>42090_osa-MIR444e:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 92 gcaagttgtgcagttgttgcctcaagcttgctgcct 127
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 94 aagttgtgcagttgttgcctcaagcttgctgc 125
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
