miRNEST 2.0, an integrative microRNA resource :: BLAST
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 186 bits (94), Expect = 3e-48
Identities = 103/106 (97%)
Strand = Plus / Plus
Query: 9 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatccattgcaagatca 68
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 60
Query: 69 tacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttg 114
|||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 163 bits (82), Expect = 4e-41
Identities = 101/106 (95%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 9 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatccattgcaagatca 68
||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcagga-ca 59
Query: 69 tacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttg 114
||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 60 tacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
>42089_osa-MIR444d:mirbase
Length = 143
Score = 139 bits (70), Expect = 5e-34
Identities = 110/121 (90%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatccattg 60
||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatc-atta 72
Query: 61 caagatcatacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcct 120
| ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 73 gatgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcct 130
Query: 121 c 121
|
Sbjct: 131 c 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 72 ttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcc 119
||||| ||||| ||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42088_osa-MIR444d:mirbase
Length = 143
Score = 139 bits (70), Expect = 5e-34
Identities = 110/121 (90%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatccattg 60
||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatc-atta 72
Query: 61 caagatcatacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcct 120
| ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 73 gatgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcct 130
Query: 121 c 121
|
Sbjct: 131 c 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 72 ttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcc 119
||||| ||||| ||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42087_osa-MIR444d:mirbase
Length = 143
Score = 139 bits (70), Expect = 5e-34
Identities = 110/121 (90%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatccattg 60
||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatc-atta 72
Query: 61 caagatcatacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcct 120
| ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 73 gatgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcct 130
Query: 121 c 121
|
Sbjct: 131 c 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 72 ttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcc 119
||||| ||||| ||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42649_tae-MIR444b:mirbase
Length = 162
Score = 85.7 bits (43), Expect = 7e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 67 catacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctc 152
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 150 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 15 ggcaccgagcatgaggcaacaactgcattacttgc 49
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 83.8 bits (42), Expect = 3e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 67 catacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcct 120
|||||||||||||||| ||||||| ||||||||| |||||||||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 113 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 66
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 81.8 bits (41), Expect = 1e-16
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatccattg 60
||||||||||||||||||||| ||||||||||||| |||| |||| |||||||| | ||
Sbjct: 1 ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaaaatcta-tg 59
Query: 61 caagatcatacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctg 117
||||| | ||| ||||| ||||||||||||||||| || |||||||||||||
Sbjct: 60 ggtcttcataatcgtgactttcttgcaagttgtgcagttgctgtctcaagcttgctg 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 9 caagcatgaggcaggaactgcattacttgcaagaaagtcac 49
||||| |||| ||| ||||||| |||||||||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaagtcac 73
>42091_osa-MIR444f:mirbase
Length = 154
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 78 ctttcatgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 152
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaag 41
||||||||||||||||||| ||||||||||||||||||
Sbjct: 3 ggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 42.1 bits (21), Expect = 9e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 48
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106
>42648_tae-MIR444:mirbase
Length = 426
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 67 catacttgtggctttcatgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||||||||||||||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctc 176
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
>42084_osa-MIR444b:mirbase
Length = 138
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 79 tttcatgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128
>42083_osa-MIR444b:mirbase
Length = 138
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 79 tttcatgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 79 tttcatgcaagttgtgcagttgttgcctcaagcttgctgcc 119
|||| |||||||||||||||||||| |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
>42086_osa-MIR444c:mirbase
Length = 138
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 79 tttcatgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||| |||||| ||||||||||||| |||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126
>42085_osa-MIR444c:mirbase
Length = 138
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 79 tttcatgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||| |||||| ||||||||||||| |||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126
>42082_osa-MIR444a:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 84 tgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||||||| |||||||| ||||||||||||||||||||
Sbjct: 85 tgcaagttatgcagttgctgcctcaagcttgctgcctc 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 43
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 84 tgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||||||| |||||||| ||||||||||||||||||||
Sbjct: 85 tgcaagttatgcagttgctgcctcaagcttgctgcctc 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 43
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42090_osa-MIR444e:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 85 gcaagttgtgcagttgttgcctcaagcttgctgcct 120
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 aagttgtgcagttgttgcctcaagcttgctgc 118
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
