miRNEST 2.0, an integrative microRNA resource :: BLAST
>42494_sbi-MIR159:mirbase
Length = 226
Score = 127 bits (64), Expect = 5e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 169 ctttgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgc 228
||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 142 ctttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgc 201
Query: 229 tctttggattgaaggaagctctgc 252
||||||||||||||| ||||||||
Sbjct: 202 tctttggattgaagggagctctgc 225
Score = 69.9 bits (35), Expect = 1e-12
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 19 agcggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcgtt 78
|||| |||||||||| |||||||||||| | |||| || ||||||| | ||||||||||
Sbjct: 1 agcgaagctcctatcattccaatgaagggcccttttcat-gggtggttccgctgctcgtt 59
Query: 79 catggttaccactgacctatctcatca 105
||||||| ||||| ||||||||||||
Sbjct: 60 catggttcccactatcctatctcatca 86
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 127 bits (64), Expect = 5e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 169 ctttgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgc 228
||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 161 ctttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgc 220
Query: 229 tctttggattgaaggaagctctgc 252
||||||||||||||| ||||||||
Sbjct: 221 tctttggattgaagggagctctgc 244
Score = 73.8 bits (37), Expect = 6e-14
Identities = 77/89 (86%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 17 gaagcggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcg 76
||||||||||||||||| |||||||||||| |||| ||| |||| || | ||||||||
Sbjct: 14 gaagcggagctcctatcattccaatgaagggccgttctgaa-gggttgttccgctgctcg 72
Query: 77 ttcatggttaccactgacctatctcatca 105
||||||||| ||||| ||||||||||||
Sbjct: 73 ttcatggttcccactatcctatctcatca 101
>42453_sof-MIR159b:mirbase
Length = 266
Score = 127 bits (64), Expect = 5e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 169 ctttgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgc 228
||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 165 ctttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgc 224
Query: 229 tctttggattgaaggaagctctgc 252
||||||||||||||| ||||||||
Sbjct: 225 tctttggattgaagggagctctgc 248
Score = 81.8 bits (41), Expect = 3e-16
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 17 gaagcggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcg 76
||||||||||||||||| |||||||||||| |||| ||| ||||||| | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaa-gggtggttccgctgctcg 75
Query: 77 ttcatggttaccactgacctatctcatca 105
||||||||| ||||| ||||||||||||
Sbjct: 76 ttcatggttcccactatcctatctcatca 104
>42452_sof-MIR159a:mirbase
Length = 265
Score = 127 bits (64), Expect = 5e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 169 ctttgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgc 228
||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 164 ctttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgc 223
Query: 229 tctttggattgaaggaagctctgc 252
||||||||||||||| ||||||||
Sbjct: 224 tctttggattgaagggagctctgc 247
Score = 73.8 bits (37), Expect = 6e-14
Identities = 77/89 (86%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 17 gaagcggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcg 76
||||||||||||||||| |||||||||||| |||| ||| |||| || | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaa-gggttgttccgctgctcg 75
Query: 77 ttcatggttaccactgacctatctcatca 105
||||||||| ||||| ||||||||||||
Sbjct: 76 ttcatggttcccactatcctatctcatca 104
>42690_zma-MIR159a:mirbase
Length = 246
Score = 119 bits (60), Expect = 1e-27
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 169 ctttgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgc 228
||||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 145 ctttgagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgc 204
Query: 229 tctttggattgaaggaagctctgc 252
||||||||||||||| ||||||||
Sbjct: 205 tctttggattgaagggagctctgc 228
Score = 81.8 bits (41), Expect = 3e-16
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 17 gaagcggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcg 76
||||||||||||||||| ||||||||||||||||| || || |||| | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcg 76
Query: 77 ttcatggttaccactgacctatctcatca 105
||||||||| ||||| ||||||||||||
Sbjct: 77 ttcatggttcccactatcctatctcatca 105
>42695_zma-MIR159f:mirbase
Length = 215
Score = 109 bits (55), Expect = 1e-24
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 170 tttgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgct 229
|||||||||||||||||| ||||||||| ||||| ||||||| |||| |||||||||||
Sbjct: 133 tttgagataggcttgtggtttgcatgaccgaggagctgcaccgaccccgtgctggccgct 192
Query: 230 ctttggattgaaggaagctctgc 252
|||||||||||||| ||||||||
Sbjct: 193 ctttggattgaagggagctctgc 215
Score = 54.0 bits (27), Expect = 6e-08
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 22 ggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcgttcat 81
||||||||| || |||||||||||||| || || ||||||| | |||||||||||||
Sbjct: 1 ggagctcctctcattccaatgaagggtccttccgaa-gggtggttccgctgctcgttcat 59
Query: 82 ggttaccactgacctatctcatc 104
|||| ||||| |||||||||||
Sbjct: 60 ggttcccactatcctatctcatc 82
>42456_sof-MIR159e:mirbase
Length = 264
Score = 107 bits (54), Expect = 4e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 169 ctttgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgc 228
||||||||||||||||||| ||||||||| || || ||||||| ||||||||||||||||
Sbjct: 163 ctttgagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgc 222
Query: 229 tctttggattgaaggaagctct 250
||||||||||||| | ||||||
Sbjct: 223 tctttggattgaaaggagctct 244
Score = 81.8 bits (41), Expect = 3e-16
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 17 gaagcggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcg 76
||||||||||||||||| |||||||||||| |||| ||| ||||||| | ||||||||
Sbjct: 16 gaagcggagctcctatcattccaatgaagggccgttctgaa-gggtggttccgctgctcg 74
Query: 77 ttcatggttaccactgacctatctcatca 105
||||||||| ||||| ||||||||||||
Sbjct: 75 ttcatggttcccactatcctatctcatca 103
>42455_sof-MIR159d:mirbase
Length = 265
Score = 105 bits (53), Expect = 2e-23
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 172 tgagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgctct 231
||||||| |||||||| ||||||||| || || ||||||| |||||||||||||||||||
Sbjct: 167 tgagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctct 226
Query: 232 ttggattgaaggaagctctgc 252
|||||||||||| ||||||||
Sbjct: 227 ttggattgaagggagctctgc 247
Score = 73.8 bits (37), Expect = 6e-14
Identities = 77/89 (86%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 17 gaagcggagctcctatctctccaatgaagggtcgttttgatcgggtggtacagctgctcg 76
||||||||||||||||| |||||||||||| |||| ||| |||| || | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaa-gggttgttccgctgctcg 75
Query: 77 ttcatggttaccactgacctatctcatca 105
||||||||| ||||| ||||||||||||
Sbjct: 76 ttcatggttcccactatcctatctcatca 104
>41868_far-MIR159:mirbase
Length = 200
Score = 87.7 bits (44), Expect = 4e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 173 gagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgctctt 232
||||||||| ||||||| ||||||| ||||| | ||| | |||||| |||||||||||||
Sbjct: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
Query: 233 tggattgaaggaagctctgc 252
||||||||||| ||||||||
Sbjct: 171 tggattgaagggagctctgc 190
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttaccact 91
||||||||||||||||||||||||||| |||||
Sbjct: 54 gggtggtacagctgctcgttcatggttcccact 86
>42700_zma-MIR159k:mirbase
Length = 200
Score = 69.9 bits (35), Expect = 1e-12
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 171 ttgagataggcttgtggcttgcatgactgaggaactgcaccatcccctt-gctggccgct 229
||||||| ||||||||| ||||||||| ||||| ||||| | ||||||| | || |||||
Sbjct: 118 ttgagatgggcttgtggtttgcatgaccgaggagctgcatcgtccccttcgttgaccgct 177
Query: 230 ctttggattgaaggaagctctgc 252
||||||||||||| ||||||||
Sbjct: 178 gtttggattgaagggagctctgc 200
Score = 61.9 bits (31), Expect = 2e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttaccactgacctatctcatca 105
|||||||||| |||||||||||||||| |||||| || |||||||||
Sbjct: 37 gggtggtacaactgctcgttcatggttcccactgtcccatctcatca 83
>42699_zma-MIR159j:mirbase
Length = 252
Score = 69.9 bits (35), Expect = 1e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttaccactgacctatctcatca 105
||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct: 89 gggtggtacagctgctcgttcatggttcccactgtcccatctcatca 135
Score = 61.9 bits (31), Expect = 2e-10
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 171 ttgagataggcttgtggcttgcatgactgaggaactgcaccatcccctt-gctggccgct 229
||||||| ||||||||| ||||||||| ||||| |||| | ||||||| | || |||||
Sbjct: 170 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 229
Query: 230 ctttggattgaaggaagctctgc 252
||||||||||||| ||||||||
Sbjct: 230 gtttggattgaagggagctctgc 252
>42698_zma-MIR159i:mirbase
Length = 252
Score = 69.9 bits (35), Expect = 1e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttaccactgacctatctcatca 105
||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct: 89 gggtggtacagctgctcgttcatggttcccactgtcccatctcatca 135
>42697_zma-MIR159h:mirbase
Length = 200
Score = 69.9 bits (35), Expect = 1e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttaccactgacctatctcatca 105
||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct: 37 gggtggtacagctgctcgttcatggttcccactgtcccatctcatca 83
>42696_zma-MIR159g:mirbase
Length = 252
Score = 69.9 bits (35), Expect = 1e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttaccactgacctatctcatca 105
||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct: 89 gggtggtacagctgctcgttcatggttcccactgtcccatctcatca 135
>42691_zma-MIR159b:mirbase
Length = 221
Score = 69.9 bits (35), Expect = 1e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttaccactgacctatctcatca 105
||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct: 58 gggtggtacagctgctcgttcatggttcccactgtcccatctcatca 104
Score = 61.9 bits (31), Expect = 2e-10
Identities = 72/83 (86%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 171 ttgagataggcttgtggcttgcatgactgaggaactgcaccatcccctt-gctggccgct 229
||||||| ||||||||| ||||||||| ||||| |||||| ||||||| | || |||||
Sbjct: 122 ttgagatgggcttgtggtttgcatgaccgaggagctgcacg-tccccttcgttgaccgct 180
Query: 230 ctttggattgaaggaagctctgc 252
||||||||||||| ||||||||
Sbjct: 181 gtttggattgaagggagctctgc 203
>41918_osa-MIR159b:mirbase
Length = 188
Score = 65.9 bits (33), Expect = 2e-11
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 173 gagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgctctt 232
||||||||||||||| ||||||||| |||| | | | || | |||||||| || |||||
Sbjct: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
Query: 233 tggattgaaggaagctctgcgtctcgatc 261
||||||||||| |||||||| ||| ||||
Sbjct: 160 tggattgaagggagctctgcatcttgatc 188
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 48.1 bits (24), Expect = 4e-06
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 173 gagataggcttgtggcttgcatgactgaggaactgcaccatccccttgctggccgctctt 232
||||||||||||||| |||||||| ||||| | || | |||| |||| ||||| ||
Sbjct: 98 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 157
Query: 233 tggattgaaggaagctctgc 252
||||||||||| ||||||||
Sbjct: 158 tggattgaagggagctctgc 177
Score = 40.1 bits (20), Expect = 9e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 ggagctcctatctctccaatgaagggtc 49
|||||||||||| ||||||||||||||
Sbjct: 4 ggagctcctatcattccaatgaagggtc 31
>42634_tae-MIR159a:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 67 cagctgctcgttcatggttaccactgacctatctc 101
||||||||||||||||||| ||||| ||||||||
Sbjct: 48 cagctgctcgttcatggttcccactatcctatctc 82
Score = 44.1 bits (22), Expect = 6e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 215 cccttgctggccgctctttggattgaaggaagctctgc 252
|||| |||| ||||| ||||||||||||| ||||||||
Sbjct: 138 ccctcgctgaccgctgtttggattgaagggagctctgc 175
Score = 40.1 bits (20), Expect = 9e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 ggagctcctatctctccaatgaagggtc 49
|||||||||||| ||||||||||||||
Sbjct: 3 ggagctcctatcattccaatgaagggtc 30
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 228 ctctttggattgaaggaagctctgc 252
|||||||||||||||| ||||||||
Sbjct: 227 ctctttggattgaagggagctctgc 251
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 228 ctctttggattgaaggaagctctgc 252
|||||||||||||||| ||||||||
Sbjct: 239 ctctttggattgaagggagctctgc 263
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 228 ctctttggattgaaggaagctctgc 252
|||||||||||||||| ||||||||
Sbjct: 239 ctctttggattgaagggagctctgc 263
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 225 ccgctctttggattgaaggaagctctgcgtctcgatc 261
||||| ||||||||||||| |||||||| ||| ||||
Sbjct: 5 ccgctgtttggattgaagggagctctgcatcttgatc 41
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gataggcttgtggcttgcat 194
||||||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcat 123
>41218_csi-MIR159:mirbase
Length = 216
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gataggcttgtggcttgcat 194
||||||||||||||||||||
Sbjct: 125 gataggcttgtggcttgcat 144
>40338_rco-MIR159:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gataggcttgtggcttgcat 194
||||||||||||||||||||
Sbjct: 99 gataggcttgtggcttgcat 118
