miRNEST 2.0, an integrative microRNA resource :: BLAST
>42623_sbi-MIR528:mirbase
Length = 84
Score = 89.7 bits (45), Expect = 5e-19
Identities = 79/89 (88%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 22 tggaaggggcatgcagaggagcaggaggtttggttggaagccgacttgtgctac-cctcg 80
||||||||||||||||||||||| |||| |||| ||||||||||| |||| |||||
Sbjct: 1 tggaaggggcatgcagaggagcacgaggcttggctggaagccgac-----ctacgcctcg 55
Query: 81 ctcgctctcctgtgcctgcctcttccatt 109
|| ||||||||||||||||||||||||||
Sbjct: 56 ctggctctcctgtgcctgcctcttccatt 84
>42481_ssp-MIR528:mirbase
Length = 92
Score = 81.8 bits (41), Expect = 1e-16
Identities = 79/92 (85%), Gaps = 6/92 (6%)
Strand = Plus / Plus
Query: 22 tggaaggggcatgcagaggagcaggaggtttggttggaagccgacttgtgcta------c 75
||||||||||||||||||||||| |||| |||| | |||||||| ||||||| |
Sbjct: 1 tggaaggggcatgcagaggagcacgaggcttggctaaaagccgacctgtgctatgctacc 60
Query: 76 cctcgctcgctctcctgtgcctgcctcttcca 107
||||||| ||||||||||||||||||||||||
Sbjct: 61 cctcgctggctctcctgtgcctgcctcttcca 92
>41806_bdi-MIR528:mirbase
Length = 160
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 5 ggctgtagcagcagcagtggaaggggcatgcagaggagcagg 46
||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 19 ggctggagcagcagcggtggaaggggcatgcagaggagcagg 60
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 81 ctcgctctcctgtgcctgcctcttccattcctgctg 116
|||| |||||||||||||||||||||||||||||||
Sbjct: 94 ctcgttctcctgtgcctgcctcttccattcctgctg 129
>42102_osa-MIR528:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 20 agtggaaggggcatgcagaggagcaggag 48
|||||||||||||||||||||||||||||
Sbjct: 1 agtggaaggggcatgcagaggagcaggag 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 85 ctctcctgtgcctgcctcttccatt 109
||||||||||| |||||||||||||
Sbjct: 64 ctctcctgtgcttgcctcttccatt 88
>42833_zma-MIR528b:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 75 ccctcgctcgctctcctgtgcctgcctcttccatt 109
|||||| | ||||||||||||||||||||||||||
Sbjct: 44 ccctcgttagctctcctgtgcctgcctcttccatt 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtggaaggggcatgcagaggagca 44
||||||||||||||||||||||||
Sbjct: 1 gtggaaggggcatgcagaggagca 24
>42832_zma-MIR528a:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 85 ctctcctgtgcctgcctcttccatt 109
|||||||||||||||||||||||||
Sbjct: 99 ctctcctgtgcctgcctcttccatt 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gtggaaggggcatgcagaggag 42
||||||||||||||||||||||
Sbjct: 1 gtggaaggggcatgcagaggag 22
